Structural variation caller using third generation sequencing
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Updated
Jul 20, 2024 - Python
Structural variation caller using third generation sequencing
Structural variant toolkit for VCFs
Long read based human genomic structural variation detection with cuteSV
A structural variation pipeline for short-read sequencing
Tools for processing and analyzing structural variants.
Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data
Merging, Annotation, Validation, and Illustration of Structural variants
A method for circular DNA detection based on probabilistic mapping of ultrashort reads
A Python package for pharmacogenomics (PGx) research
Support Vector Structural Variation Genotyper
Python package to annotate and visualize gene fusions.
A computation framework for genome-wide detection of enhancer-hijacking events from chromatin interaction data in re-arranged genomes
A tool for genotyping Variable Number Tandem Repeats (VNTR) from sequence data
Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.
SNP-Assisted SV Calling and Phasing Using ONT
A Framework to call Structural Variants from NGS based datasets
Complex structural variant detection from WGS data
Upscaling SV detection to a multi-population level.
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