Skip to content
@bcgsc

BC Cancer Canada's Michael Smith Genome Sciences Centre

Sequencing Centre for Genomics and Bioinformatics Research

Pinned Loading

  1. RNA-Bloom RNA-Bloom Public

    🌺 reference-free transcriptome assembly for short and long reads

    Java 85 7

  2. LongStitch LongStitch Public

    Correct and scaffold assemblies using long reads

    Makefile 43 7

  3. ntRoot ntRoot Public

    🌳 Human ancestry inference from genomic data

    Python 3

  4. btllib btllib Public

    Bioinformatics Technology Lab common code library

    C++ 21 5

  5. ntEdit ntEdit Public

    ✏️ Genome assembly polishing & SNV detection

    C++ 63 9

  6. goldrush goldrush Public

    Linear-time de novo Long Read Assembler

    C++ 33 2

Repositories

Showing 10 of 114 repositories
  • pori_python Public
    bcgsc/pori_python’s past year of commit activity
    Python 0 GPL-3.0 1 0 1 Updated Jul 23, 2024
  • pori_ipr_api Public

    Integrated Pipeline Reports (IPR) API, the reporting API as part of the PORI platform

    bcgsc/pori_ipr_api’s past year of commit activity
    JavaScript 8 0 0 2 Updated Jul 23, 2024
  • abyss Public

    🔬 Assemble large genomes using short reads

    bcgsc/abyss’s past year of commit activity
    C++ 305 103 5 0 Updated Jul 23, 2024
  • pori_ipr_client Public

    Integrated Pipeline Reports (IPR) client. The web interface for the reporting application as part of PORI

    bcgsc/pori_ipr_client’s past year of commit activity
    TypeScript 8 GPL-3.0 1 0 3 Updated Jul 22, 2024
  • pori_graphkb_api Public

    REST API for the GraphKB project

    bcgsc/pori_graphkb_api’s past year of commit activity
    JavaScript 4 GPL-3.0 1 6 2 Updated Jul 22, 2024
  • btllib Public

    Bioinformatics Technology Lab common code library

    bcgsc/btllib’s past year of commit activity
    C++ 21 5 28 (1 issue needs help) 6 Updated Jul 22, 2024
  • pori_graphkb_loader Public

    The Loaders for GraphKB. Imports content from external sources via the GraphKB REST API

    bcgsc/pori_graphkb_loader’s past year of commit activity
    JavaScript 6 GPL-3.0 4 12 2 Updated Jul 22, 2024
  • straglr Public

    Tandem repeat expansion detection or genotyping from long-read alignments

    bcgsc/straglr’s past year of commit activity
    Python 52 9 9 1 Updated Jul 19, 2024
  • btl Public

    🔬 Bioinformatics Technology Lab, Genome Sciences Centre

    bcgsc/btl’s past year of commit activity
    HTML 1 3 4 0 Updated Jul 15, 2024
  • NanoSim Public

    Nanopore sequence read simulator

    bcgsc/NanoSim’s past year of commit activity
    Python 223 52 35 (8 issues need help) 1 Updated Jul 11, 2024
View all repositories