DELLY2: Structural variant discovery by integrated paired-end and split-read analysis
-
Updated
Aug 23, 2024 - C++
DELLY2: Structural variant discovery by integrated paired-end and split-read analysis
Structural variant and indel caller for mapped sequencing data
Fast and accurate gene fusion detection from RNA-Seq data
Graph realignment tools for structural variants
A method for variant graph genotyping based on exact alignment of k-mers
The Modular Aligner and The Modular SV Caller
SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data
Population-wide Deletion Calling
Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.
Method to optimally select samples for validation and resequencing
Identification of segmental duplications in the genome
Structural variant VCF annotation, duplicate removal and comparison
Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA
Linear-time, low-memory construction of variation graphs
Discovery and Genotyping of Novel Sequence Insertions in Many Sequenced Individuals
Hybrid approach for detection of Insertions and Deletions from NGS data
Identify split reads in given chromosomal regions
Linked-reads based structural variant caller with barcode indexing
Studies structural variant callers on large simulated populations sequenced with PacBio CCS
Validate SVs with CIGAR Strings
Add a description, image, and links to the structural-variation topic page so that developers can more easily learn about it.
To associate your repository with the structural-variation topic, visit your repo's landing page and select "manage topics."