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This repository has been archived by the owner on Jan 24, 2024. It is now read-only.

Issues: sqjin/CellChat

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Issues list

The difference between the weight and prob
#555 opened Feb 18, 2023 by Kiven-zero-Li updated Jan 24, 2024
1
How to use subsetCellChat?
#210 opened May 27, 2021 by lizanyu updated Jan 23, 2024
17
error in subsetCellChat function
#533 opened Jan 10, 2023 by rbatorsky updated Jan 23, 2024
4
explanation of the df from subsetCommunication
#750 opened Jan 19, 2024 by amberqiong updated Jan 23, 2024
4
netMappingDEG error
#698 opened Sep 20, 2023 by vasikara17 updated Jan 22, 2024
4
error in netVisual_bubble plotting
#751 opened Jan 22, 2024 by Zhasha95 updated Jan 22, 2024
4
How to save multiple plots produced by netVisual_circle? documentation Improvements or additions to documentation suggestion
#446 opened Jul 30, 2022 by lwlive updated Jan 22, 2024
3
Running CellChat with a large dataset
#244 opened Jul 13, 2021 by daccachejoe updated Jan 22, 2024
12
Using a two-species sample
#746 opened Jan 16, 2024 by juanjaureguilozano updated Jan 22, 2024
1
could not find function "findEnrichedSignaling"
#748 opened Jan 17, 2024 by yueli8 updated Jan 22, 2024
1
Error in base::colSums(x, na.rm = na.rm, dims = dims, ...) : 'x' must be an array of at least two dimensions
#747 opened Jan 17, 2024 by yueli8 updated Jan 22, 2024
5
mergeCellChat
#749 opened Jan 17, 2024 by dianalee92 updated Jan 17, 2024
unused arguments (min.dist = 0.3, n.neighbors = k)
#745 opened Jan 15, 2024 by yueli8 updated Jan 16, 2024
1
Error in if (dim(prob)[3] <= 25) { : argument is of length zero
#735 opened Dec 15, 2023 by yueli8 updated Jan 15, 2024
2
Error when using netVisual_embeddingZoomIn with merged object
#286 opened Sep 10, 2021 by ccruizm updated Jan 14, 2024
5
[email protected] 0 x 12257 sparse Matrix of class "dgCMatrix"
#743 opened Jan 8, 2024 by changtongwa updated Jan 8, 2024
2
Error in createCellChat object
#742 opened Jan 7, 2024 by TZUwang updated Jan 7, 2024
Issue with installing CellChat package in R studio
#739 opened Dec 29, 2023 by Navya156 updated Jan 4, 2024
1
Why haven't we utilized single-cell proteomics for cell communication recognition and prediction?
#740 opened Jan 3, 2024 by YuzhiSun updated Jan 4, 2024
1
parameter "group.by" in subsetCellChat doesn't work
#738 opened Dec 29, 2023 by ttrrtttrrt updated Dec 29, 2023
A problem with a error message in identifyOverExpressedGenes in CellChat. bug Something isn't working
#264 opened Aug 11, 2021 by weichloe updated Dec 29, 2023
9
NetP empty after running computeCommunProb
#736 opened Dec 19, 2023 by Dena2021 updated Dec 29, 2023
1
unable to start device 'png' in save the plots of the all inferred network
#638 opened Jun 16, 2023 by DelongZHOU updated Dec 29, 2023
2
Missing Column annotation in LRsig after merge cellchat and celltalk L-R pair
#737 opened Dec 28, 2023 by wuy33 updated Dec 28, 2023
createCellChat：in match.arg(datatype) : 'arg' must be NULL or a character vector
#663 opened Aug 9, 2023 by haobeny updated Dec 20, 2023
4
ProTip! What’s not been updated in a month: updated:<2024-06-04.