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Issues: sqjin/CellChat
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How to draw figure 4d in your paper
documentation
Improvements or additions to documentation
#41
opened Sep 6, 2020 by
gynecoloji
updated Oct 7, 2020
How to re-label cell identity after the analysis was already done?
documentation
Improvements or additions to documentation
enhancement
New feature or request
#35
opened Aug 31, 2020 by
ilcink
updated Oct 7, 2020
A question about drawing a picture that representing number of L-R pairs.
documentation
Improvements or additions to documentation
#8
opened Jul 31, 2020 by
Rui-Jing
updated Oct 7, 2020
how to draw bubble plot by cellchat
documentation
Improvements or additions to documentation
duplicate
This issue or pull request already exists
#14
opened Aug 9, 2020 by
tn00992786
updated Oct 7, 2020
How to extract some specific types of cells to construct a independent communication circleplot?
documentation
Improvements or additions to documentation
enhancement
New feature or request
#33
opened Aug 21, 2020 by
Rui-Jing
updated Jan 25, 2021
A problem when using "myidentifyCommunicationPatterns"
bug
Something isn't working
documentation
Improvements or additions to documentation
#16
opened Aug 10, 2020 by
beyond1980
updated Apr 15, 2021
After updated CellChat to lasted version 1.1.0, "netEmbedding" function don't work.
#211
opened May 31, 2021 by
doctorxie
updated Jun 19, 2021
Comparison analysis of multiple datasets with different cellular compositions.
#220
opened Jun 15, 2021 by
charlesgwellem
updated Jun 19, 2021
pvalue in netvisual_bubble for comparing datasets
#226
opened Jun 19, 2021 by
laijen000
updated Jun 19, 2021
Comparing cell populations with different amounts of cell
#229
opened Jun 22, 2021 by
michaelkutza
updated Jun 26, 2021
Cell-cell communication matrix - individual cells
#228
opened Jun 22, 2021 by
s849
updated Jun 26, 2021
Significant interaction results between two cell types in df.net, but not in cellchat@net$count
#227
opened Jun 21, 2021 by
Chanele13
updated Jun 29, 2021
Reorder but get the same pattern in "netAnalysis_signalingRole_network"
#240
opened Jul 9, 2021 by
phoebee-h
updated Jul 9, 2021
How to view differential circle plot with single ligand-receptor pairs?
#242
opened Jul 10, 2021 by
ColeKeenum
updated Jul 15, 2021
Stop commands in case of 0 results instead of returning a valid (empty) object
#243
opened Jul 13, 2021 by
stemangiola
updated Jul 15, 2021
Ligands and receptor of the pathway were expressed, but it can't be detected through cellchat
#250
opened Jul 18, 2021 by
Emily-Y21
updated Jul 19, 2021
netAnalysis_river for subset of pathways and order them based on similarity
#255
opened Jul 27, 2021 by
jv-20
updated Aug 4, 2021
Suggestion: Circle plot for null interactions
suggestion
#273
opened Aug 21, 2021 by
tsengpy
updated Aug 21, 2021
Some cells do not show up on the outgoing but not on the incoming river plots.
#272
opened Aug 18, 2021 by
charlesgwellem
updated Aug 21, 2021
computeCommunProb :Error in data.use[RsubunitsV, ]
#257
opened Jul 30, 2021 by
alhadjil
updated Aug 21, 2021
Filter interactions based on a min umi count
#276
opened Aug 24, 2021 by
TapsiS
updated Aug 24, 2021
Updating CellChatDB by adding ligand-receptor pairs from OmniPath
#260
opened Aug 9, 2021 by
superman2412
updated Aug 24, 2021
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