Skip to content
This repository has been archived by the owner on Jan 24, 2024. It is now read-only.

[email protected] 0 x 12257 sparse Matrix of class "dgCMatrix" #743

Open
changtongwa opened this issue Jan 8, 2024 · 2 comments
Open

Comments

@changtongwa
Copy link

I meet a question that when i build a CellCall file
cellchat = createCellChat(object = T_cells1,meta [email protected], group.by = "celltype")

and find
cellchat@data 21247 x 12257 sparse Matrix of class "dgCMatrix"
but
[email protected] 0 x 12257 sparse Matrix of class "dgCMatrix"

Hope you can give me a hand,thank you.

@changtongwa
Copy link
Author

sorry,I find the question is silly.THANK YOU

@changtongwa
Copy link
Author

changtongwa commented Jan 8, 2024

I build a CellCall file through seurat ,but there is a error

cellchat <- identifyOverExpressedGenes(cellchat)

Error : in identifyOverExpressedGenes(cellchat) : Please check [email protected] and ensure that you have run subsetData and that the data matrix [email protected] looks OK.

so does it mean I have to get signaling before I build the CellCall file ?

Sign up for free to subscribe to this conversation on GitHub. Already have an account? Sign in.
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant