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Issues: sqjin/CellChat

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Issues list

Differential expression analysis reports same pair L-R as both downregulated and upregulated ???
#403 opened Apr 8, 2022 by giovanegt
2 👍 5
netClustering(cell chat, type = "functional") Error
#571 opened Mar 8, 2023 by nandini0910
6 👍 5
Bulk-RNA Seq recommended processing
#237 opened Jul 2, 2021 by cswoboda
9 👍 2
The difference between the weight and prob
#555 opened Feb 18, 2023 by Kiven-zero-Li
1 👍 2
netvisual_circle error
#547 opened Feb 12, 2023 by Ketomihine
14 👍 2
Filter interactions based on a min umi count
#276 opened Aug 24, 2021 by TapsiS
👍 2
netVisual_heatmap Error: You should have at least two distinct break values.
#460 opened Aug 17, 2022 by yamajackr
2 👍 1
mergeCellChat : 0 genes. 0 cells.
#532 opened Jan 8, 2023 by zochzh
1 👍 1
adding fly interaction database to cellchat
#318 opened Nov 9, 2021 by ChintanChhatbar
👍 1
netVisual_diffInteraction meaning of edge width
#675 opened Aug 18, 2023 by VGerakopoulos
👍 1
cellchat as a part of Liana 0.0.7 giving an unusual error
#381 opened Mar 2, 2022 by paulyashna
👍 1
Error in obj2 - obj1 : non-conformable arrays
#379 opened Feb 23, 2022 by Dicky666520
2 👍 1
netVisual_bubble question
#354 opened Jan 21, 2022 by yifeisun03
1 👍 1
communication probability vs level of expression
#384 opened Mar 5, 2022 by pedriniedoardo
👍 1
What makes the differences in the relative information flow
#400 opened Apr 6, 2022 by Jiajianwang2022
1 👍 1
No signaling genes when using mergeCellChat()
#383 opened Mar 5, 2022 by learning-MD
1 👍 1
Arrow missing from netVisual_chord_gene
#266 opened Aug 15, 2021 by aaronkwong
6 👍 1
P value 1 zero Prob o after identifyOverExpressedGenes
#558 opened Feb 21, 2023 by ShwethaRaghunathan
👍 1
Possible amendment on the netAnalysis_signalingRole_heatmap function
#674 opened Aug 16, 2023 by VGerakopoulos
👍 1
Seemingly incorrect differential analysis
#342 opened Dec 21, 2021 by GBeattie
19 👍 1
configure axis range for scatterplots and barplots?
#380 opened Feb 28, 2022 by artemisiat
1 👍 1
A problem when using "myidentifyCommunicationPatterns" bug Something isn't working documentation Improvements or additions to documentation
#16 opened Aug 10, 2020 by beyond1980
20
Error with netClustering(cellchat, type = "functional")
#174 opened Apr 13, 2021 by YitengDang
18
re-order RLpairs on bubble plots
#168 opened Mar 30, 2021 by hooperj
7
error in netVisual_bubble plotting
#751 opened Jan 22, 2024 by Zhasha95
4
ProTip! Adding no:label will show everything without a label.