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Perform DMR analysis on the same file
question
Looking for clarification on inputs and/or outputs
#174
opened Apr 26, 2024 by
OceaneMion
Obtain Global methylation level of the genome
question
Looking for clarification on inputs and/or outputs
#173
opened Apr 25, 2024 by
OceaneMion
How to detect the background noise from control and test samples
question
Looking for clarification on inputs and/or outputs
#172
opened Apr 24, 2024 by
xiangpingyu
threshold and motifs
enhancement
New feature or request
question
Looking for clarification on inputs and/or outputs
#166
opened Apr 17, 2024 by
TiBi-MU
Question about CpGs without modification
question
Looking for clarification on inputs and/or outputs
#164
opened Apr 16, 2024 by
VasLem
Perform mean of probability for each read position with modkit extract
question
Looking for clarification on inputs and/or outputs
#163
opened Apr 16, 2024 by
OceaneMion
question about how to define the DRACH-motif
question
Looking for clarification on inputs and/or outputs
#161
opened Apr 11, 2024 by
mocherry
failed to get modbase info for record ..., Skipped: AUX data not found
troubleshooting
workflow and data preparation questions
#159
opened Apr 10, 2024 by
ArnavBharti
Modification summary per BED line
enhancement
New feature or request
#154
opened Apr 5, 2024 by
davidsilvapires
Parallelization
question
Looking for clarification on inputs and/or outputs
#150
opened Mar 25, 2024 by
martabaragli
Multiple testing correction: modkit dmr
question
Looking for clarification on inputs and/or outputs
#148
opened Mar 14, 2024 by
ericmsmall
Detect methylation data background noise
question
Looking for clarification on inputs and/or outputs
#147
opened Mar 14, 2024 by
Macdot3
Is there a way to run dmr pair with multiple replicates with a region BED file?
enhancement
New feature or request
#143
opened Mar 7, 2024 by
lance0499
polars script modkit extract
question
Looking for clarification on inputs and/or outputs
#133
opened Feb 16, 2024 by
Macdot3
Inconsistent results when using call-mods + pileup or pileup directly
#132
opened Feb 16, 2024 by
ppapasaikas
modkit dmr function
question
Looking for clarification on inputs and/or outputs
#125
opened Feb 7, 2024 by
bebert30
Feature request: read from url
enhancement
New feature or request
#123
opened Jan 31, 2024 by
wdecoster
modkit extract takes very long
enhancement
New feature or request
extract
modkit extract
#119
opened Jan 24, 2024 by
pkerbs
ProTip!
Exclude everything labeled
bug
with -label:bug.