This repository has been archived by the owner on Mar 21, 2024. It is now read-only.

Commits

Commits on Mar 30, 2022

Ignore Sphinx build folders (#698 )
fepegar
committedMar 30, 2022

Commits on Mar 29, 2022

Deprecate manual changelog (#707 )
fepegar
committedMar 29, 2022
Update hi-ml submodule (#709 )
fepegar
committedMar 29, 2022

Commits on Mar 23, 2022

Import submodules to sys.path to fix autodoc's warning (#704 )
JacopoTeneggi
committedMar 23, 2022

Commits on Mar 22, 2022

Automatically and linearly scale the learning rate of the SSL encoder to the number of GPUS (#667 )
maxilse
committedMar 22, 2022
Fix some Sphinx warnings (#699 )
fepegar
committedMar 22, 2022

Commits on Mar 15, 2022

Specify formatter_class=argparse.ArgumentDefaultsHelpFormatter in generic_parsing.py to show default values for arguments in help message (#689 )
JacopoTeneggi
committedMar 15, 2022
Improve setup for running the HelloWorld model in AzureML (#693 )
ant0nsc
committedMar 15, 2022

Commits on Mar 14, 2022

Update TorchIO version (#677 )
fepegar
committedMar 14, 2022

Commits on Mar 10, 2022

Ensure the shape of input patches is compatible with model constraints (#682 )
fepegar
committedMar 10, 2022
Replace data quality folder with a link to the commit (#692 )
javier-alvarez
committedMar 10, 2022

Commits on Mar 9, 2022

Clean up legacy code (#671 )
javier-alvarez
committedMar 9, 2022
Pad model outputs if they are smaller than the inputs (#681 )
fepegar
committedMar 9, 2022

Commits on Mar 8, 2022

Fix Markdown linting errors (#684 )
fepegar
committedMar 8, 2022

Commits on Mar 7, 2022

Fix missing separator error in docs Makefile (#683 )
fepegar
committedMar 7, 2022
Print out name of log level, not only the number (#678 )
fepegar
committedMar 7, 2022

Commits on Mar 4, 2022

Add FP and TN to DeepMIL outputs and configure outputs for multi-class classification (#679 )
harshita-s
committedMar 4, 2022

Commits on Mar 3, 2022

Updated README.md (#680 )

ktakeda1
and
fepegar
committedMar 3, 2022

Commits on Mar 1, 2022

Fix DeepMIL metrics bug (#674 )
dccastro
committedMar 1, 2022

Commits on Feb 23, 2022

Replace RadIO with TorchIO for patch-based inference (#666 )

fepegar
and
javier-alvarez
committedFeb 23, 2022

Commits on Feb 21, 2022

Add subsampling transform and mean pooling (#656 )
dccastro
committedFeb 21, 2022

Commits on Feb 16, 2022

Fix DeepMIL for TCGA CRCK dataset (#659 )
maxilse
committedFeb 16, 2022

Commits on Feb 9, 2022

Enable fine-tuning in Deepmil (#650 )
harshita-s
committedFeb 9, 2022

Commits on Feb 7, 2022

Add dropout to DeepMIL and fix feature extractor setup (#653 )
dccastro
committedFeb 7, 2022

Commits on Feb 4, 2022

Re-enable Linux build (#655 )
ant0nsc
committedFeb 4, 2022
Fix for stuck Linux build: Move pytest to Windows (#652 )
ant0nsc
committedFeb 4, 2022

Commits on Feb 1, 2022

Commits on Jan 25, 2022

Enabling DeepSMILE on large encoded datasets (#637 )
vale-salvatelli
committedJan 25, 2022
Cancel queued AzureML jobs when starting a PR build (#640 )
ant0nsc
committedJan 25, 2022

Commits on Jan 24, 2022

SimCLR recovery test (#643 )
maxilse
committedJan 24, 2022
Panda SSL tile selection and binary evaluation (#635 )

harshita-s
and
t-hsharma
committedJan 24, 2022

Commits on Jan 21, 2022

Fix length problem in SSL Cosine LR (#638 )
ant0nsc
committedJan 21, 2022

Commits on Jan 19, 2022

Plotting heatmap and thumbnails for test PANDA slides (#634 )

harshita-s
and
t-hsharma
committedJan 19, 2022