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Issues list

Clean out remaining old goa references (e.g. rna, complex) now that we've switched to goa "plus" files bug (B: affects usability)
#2341 opened Jul 5, 2024 by kltm updated Jul 5, 2024
@kltm
1
Switch to "GO" mirror version of MGI "upstream" file, moving off of frozen historical one enhancement
#2330 opened May 16, 2024 by kltm updated May 16, 2024
Start using GPAD / GPI 2.0 compatible ontobio ASAP enhancement
#2286 opened Apr 4, 2024 by kltm updated May 13, 2024
@dustine32 @sierra-moxon
3
Confirm existence of GPI 2.0 file as output of pipeline, complimentary to GPAD 2.0 enhancement
#2288 opened Apr 4, 2024 by kltm updated May 2, 2024
@kltm
5
Merge in metadata changes necessary for using our new (internal) MGI upstreams enhancement
#2285 opened Apr 4, 2024 by kltm updated May 2, 2024
@sierra-moxon
1
Create end-user GAF validation SOP / tooling enhancement
#2303 opened Apr 26, 2024 by kltm updated Apr 27, 2024
@kltm
1
Provide GPAD/GPI 2.0 examples for public use bug (C: surface issue)
#2300 opened Apr 20, 2024 by kltm updated Apr 23, 2024
@kltm @sierra-moxon
2
Make (and use) isoform promotion GORULE enhancement
#2287 opened Apr 4, 2024 by kltm updated Apr 13, 2024
@dustine32 @sierra-moxon @pgaudet
4
Change the name of goa_* files in annotations/ to clarify derived status bug (C: surface issue)
#2271 opened Mar 25, 2024 by kltm updated Mar 28, 2024
5 tasks
@kltm
1
Update GeneDB metadata to VEuPathDB metadata enhancement
#2256 opened Mar 11, 2024 by kltm updated Mar 11, 2024
@kltm
2
Ensure that the current /go-cam web app can operate through the root domain proxy bug (B: affects usability)
#965 opened Dec 20, 2018 by kltm updated Mar 8, 2024
12
GO procedure for if/when OMIM CURIE/identifier changes to "MIM" bug (C: surface issue)
#2238 opened Feb 14, 2024 by kltm updated Feb 15, 2024
10
On GO annotations download page, links to HTTP resources can cause browser issues bug (B: affects usability)
#2154 opened Oct 30, 2023 by kltm updated Nov 22, 2023
7
Implement GPAD/GPI cross check so that bad identifiers are eliminated early and do not make it to output bug (A: showstopper)
#2066 opened Sep 12, 2023 by kltm updated Oct 6, 2023
@dustine32 @mugitty
12
List (and deal with) external links (GO-provided widgets or public interfaces) and traffic come into the Noctua curation system
#1928 opened Nov 17, 2022 by kltm updated Jul 26, 2023
2 tasks
@kltm
1
Change metadata to improve text on annotation downloads page bug (C: surface issue)
#1018 opened Mar 8, 2019 by kltm updated Jun 29, 2023
5
Create a GO-CAM -> TSV file for end user consumption
#2008 opened May 18, 2023 by kltm updated May 26, 2023
1 task
@balhoff
10
Make sure that species name and abbreviation information comes from a single metadata source enhancement
#2001 opened Apr 15, 2023 by kltm updated Apr 15, 2023
1
AWS Lambda dropping support for python 3.6; catalog use of python 3.6 in GO lambda functions question
#1834 opened Apr 15, 2022 by kltm updated Mar 15, 2023
8
Filtered goa_uniprot_all_noiea.gaf file does not contain any kind of header; add "edited" header comment to goa_uniprot_all.gaf bug (C: surface issue)
#1753 opened Nov 2, 2021 by kltm updated Mar 1, 2023
2
We should standardize on a single email address for documentation bug (C: surface issue) documentation
#1877 opened Jul 6, 2022 by kltm updated Jul 7, 2022
@suzialeksander
2
Examine traffic (from the Alliance / AGR?) coming through the GO API
#1872 opened Jul 2, 2022 by kltm updated Jul 6, 2022
3
Clean up SynGO metadata and reimport into production and development branches of noctua-models bug (B: affects usability)
#1466 opened Apr 17, 2020 by kltm updated Jul 4, 2022
3 tasks
9
Update user-facing software and documentation to have correct copyright dates bug (C: surface issue)
#1761 opened Jan 7, 2022 by kltm updated May 16, 2022
3 of 5 tasks
10
Make sure that all public resources are served from a *.geneontology.org domain bug (B: affects usability)
#1800 opened Feb 23, 2022 by kltm updated Feb 23, 2022
6 tasks
ProTip! Updated in the last three days: updated:>2024-07-04.