Repository holding the code for the drugfindR R package
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Updated
Oct 8, 2024 - R
Repository holding the code for the drugfindR R package
A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
National Microbiome Data Collaborative (NMDC) unified data model
Data Science project about Parkinson Disease
This is mirror repository of https://gitlab.services.universiteitleiden.nl/duc/oleveler
Single-cell analysis in Python. Scales to >1M cells.
Annotated data.
ImaGene: A multi-omic ML/AI software with guided operational reports and supporting files
Whole Exome Sequencing (WES) analysis of a family trio (father, mother, proband) using command-line tools on a Linux HPC cluster. The pipeline includes quality control, read alignment, variant calling, and annotation, adapted from the GALAXY platform.
R/shiny interface for interactive visualization of data in SummarizedExperiment objects
Framework to build, evaluate, select, and compare ML classification and regression models using high-dimensional biological data and other covariates
Framework to build, evaluate, select, and compare ML survival analysis models using high-dimensional biological data and other covariates
Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
Small python CLT that generates a comparative plot for multiple rnaQUAST reports
Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.
A simulation of the biological process of DNA transcription developed at the Lavigne Lab - IMBB FoRTH.
An ontology of cell types
Open-ST: profile and analyze tissue transcriptomes in 3D with high resolution in your lab
PANDORA - Predictive Analytics aNd Data Oriented Research Applications 💻
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