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370 Open 866 Closed
370 Open 866 Closed
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Issues list

range constraint for gene_function_id on Class FunctionalAnnotationAggMember
#2138 opened Jul 19, 2024 by aclum
resume efforts to detect examples coverage
#2137 opened Jul 19, 2024 by turbomam
@turbomam
1
delete assets/yq-for-nmdc_schema_accepting_legacy_ids.txt
#2136 opened Jul 19, 2024 by turbomam
@turbomam
berkeley: Fix range for was_generated_by slot
#2134 opened Jul 19, 2024 by aclum
1
@aclum
Draft: add details to InstrumentModelEnum
#2133 opened Jul 18, 2024 by mslarae13
document the fact that working on a PR template is the only case in which PRs don't require review
#2126 opened Jul 17, 2024 by turbomam
@mslarae13
1
berkeley-schema-fy24: Update part_16 migrator to include metatranscriptome_expression_analysis_set collection berkeley-fy24-refactor Label to describe issues created during the December 2023 hackathon for schema refactor X SMALL Less than 8 hours, less than 1 day
#2124 opened Jul 16, 2024 by eecavanna
1
@eecavanna
berkeley-schema-fy24: id slot_usage resulting in badly minted IDs bug Something isn't working
#2122 opened Jul 16, 2024 by kheal
2 tasks
@kheal
17
known_as slot needs description and structured_pattern constraints berkeley-fy24-refactor Label to describe issues created during the December 2023 hackathon for schema refactor
#2121 opened Jul 16, 2024 by kheal
MIxS Environmental Context slot grouping
#2119 opened Jul 12, 2024 by aclum
2 tasks
@turbomam
berkeley-schema-fy24: Schema version underlying SchemaView instance changes from one release to the next berkeley-fy24-refactor Label to describe issues created during the December 2023 hackathon for schema refactor bug Something isn't working
#2100 opened Jul 2, 2024 by eecavanna
@eecavanna
1
remove logic to repair curies
#2093 opened Jul 1, 2024 by aclum
@turbomam
1
Docker Compose shows warning saying version (specifier) is obsolete bug Something isn't working devops infrastructure not content This issue is about generating output, keeping the repo organized etc. low priority X SMALL Less than 8 hours, less than 1 day
#2090 opened Jun 28, 2024 by eecavanna
@eecavanna
produce a nmdc-schema YAML artifact with deprecated elements included
#2080 opened Jun 18, 2024 by sierra-moxon
1
2024-06-18 id pattern validation summaries and SPARQL-based referential integrity checks on MongoDB contents with and without migration
#2078 opened Jun 18, 2024 by turbomam
@turbomam
6
Migrations: Make it easier to test migrators against a Mongo database documentation Improvements or additions to documentation enhancement New feature or request X SMALL Less than 8 hours, less than 1 day
#2067 opened Jun 14, 2024 by eecavanna
@eecavanna
check if classes associated with alternative_identifiers can use ANY alternative_identifiers
#2066 opened Jun 13, 2024 by turbomam
@turbomam
5
Find a home for these comments taken from src/scripts/report_biosamples_per_study.py
#2065 opened Jun 13, 2024 by turbomam
@turbomam
Remodel class that aggregates steps of WorkflowExecution for easier schema traversal
#2060 opened Jun 12, 2024 by kheal
1
write a notebook report class.slot paths that take a ControlledTermValue* range
#2058 opened Jun 11, 2024 by turbomam
@turbomam
standardize quotation marks in schema and example data files
#2050 opened Jun 5, 2024 by turbomam
2
reassess temporal modeling esp. for WorkflowChain
#2049 opened Jun 5, 2024 by turbomam
1
Extraction class lacks a constraint that indicates its expected usage
#2048 opened Jun 5, 2024 by anastasiyaprymolenna
generate reports of all observed MIxS environmental triad slot values, within a given context
#2047 opened Jun 5, 2024 by turbomam
@mslarae13 @JamesTessmer
2
remove unused Python code
#2038 opened Jun 5, 2024 by turbomam
@turbomam
2
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