Skip to content
@microbiomedata

National Microbiome Data Collaborative

National Microbiome Data Collaborative

Pinned Loading

  1. nmdc-schema nmdc-schema Public

    National Microbiome Data Collaborative (NMDC) unified data model

    Python 27 8

  2. NMDC_documentation NMDC_documentation Public

    Document workflows, schemas, and portal

    2 3

Repositories

Showing 10 of 74 repositories
  • nmdc-edge Public

    Web-based interface to the NMDC EDGE platform

    microbiomedata/nmdc-edge’s past year of commit activity
    JavaScript 3 0 76 (1 issue needs help) 2 Updated Jul 22, 2024
  • metaT Public

    Metatranscriptomics workflow

    microbiomedata/metaT’s past year of commit activity
    WDL 3 2 13 2 Updated Jul 21, 2024
  • nmdc-field-notes Public

    Mobile app for metadata collection on the go

    microbiomedata/nmdc-field-notes’s past year of commit activity
    TypeScript 1 0 21 1 Updated Jul 21, 2024
  • refscan Public

    Command-line program that scans NMDC database for referential integrity violations

    microbiomedata/refscan’s past year of commit activity
    Python 1 0 4 0 Updated Jul 20, 2024
  • ReadsQC Public
    microbiomedata/ReadsQC’s past year of commit activity
    WDL 3 6 5 2 Updated Jul 19, 2024
  • metaMAGs Public

    Workflow for metagenome assembled genomes generation.

    microbiomedata/metaMAGs’s past year of commit activity
    Python 4 4 5 3 Updated Jul 19, 2024
  • mg_annotation Public

    Metagenome Annotation Workflow

    microbiomedata/mg_annotation’s past year of commit activity
    WDL 3 7 2 3 Updated Jul 19, 2024
  • nmdc_automation Public

    Prototype automation

    microbiomedata/nmdc_automation’s past year of commit activity
    Python 3 2 42 6 Updated Jul 19, 2024
  • nmdc-runtime Public

    Runtime system for NMDC data management and orchestration

    microbiomedata/nmdc-runtime’s past year of commit activity
    HTML 4 3 93 (5 issues need help) 11 Updated Jul 19, 2024
  • berkeley-schema-fy24 Public Forked from microbiomedata/nmdc-schema

    A fork of the nmdc-schema, for refactoring based on Monterey insights

    microbiomedata/berkeley-schema-fy24’s past year of commit activity
    Python 6 CC0-1.0 8 0 12 Updated Jul 19, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…