Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researchers from wet and dry lab to perform downstream Bioinformatics analysis

A flexible, automation and pragmatic workflow tool to process the NGS data.

a shiny frontend for the nextflow-fastp pipeline

process and analyze paired-end ATAC-Seq data

Snakemake workflow for transposable element RNA-Seq using TEtranscripts

CytoMeth tool compiles a set of open source software named in the Roche pipeline guidelines to perform SeqCap Epi data analysis.

Pipeline for polymap and QTL Mapping

Here is my participation to the 2024 edition of the HackBio Internship (AMR in cancer track).

This repository contains bash shell scripts

Here is my participation to the 2024 edition of the HackBio Internship (AMR in cancer track).

Code and scripts used for Worth et al. 2022: "Receptor editing constrains development of phosphatidyl choline-specific B cells in VH12-transgenic mice".

main Repository for my Master's Thesis work

Code used to analyze and produce figures during tenure in the Translational Tumor Engineering Lab

Bioinformatic scripts for the manuscript concerning interchromosomal interaction and gene expression patterns of K562 cells treated by hemin

SRSF shape analysis framework for sequencing data