Nextflow pipeline for analysis of direct RNA Nanopore reads
-
Updated
Mar 23, 2023 - Nextflow
Nextflow pipeline for analysis of direct RNA Nanopore reads
A collection of unexpected challenges and learnings with nextflow and nf-core.
TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly
NeoFlow: a proteogenomics pipeline for neoantigen discovery
Nextflow pipeline for genome annotation of protein-coding genes
A pipeline for comprehensive genomic analyses of Mycobacterium tuberculosis with a focus on clinical decision making as well as research
Sanger Cellular Genetics single-cell ATAC-seq pipeline.
Flujos de trabajos desarrollados y automatizados en el Inmegen para el procesamiento de datos genómicos y transcriptómicos.
Template for creating Nextflow DSL2 pipelines
Bacterial Assembly and Antimicrobial Resistance Genes In NextFlow
A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region expansions (RREs) from short DNA reads
Python library to execute batches of jobs using nextflow.
Nextflow pipeline for extracting and counting clonal barcodes
Nextflow wrapper for the dragonflye assembler, with additional QC
A Nextflow pipeline to experiment with DSL2 + Zero Mess
A simple nextflow pipeline for Illumina run metrics (InterOp) and generation of fastq files (bcl2fastq)
Mbovpan is a nextflow bioinformatic pipeline for Mycobacterium bovis pangenome analysis. The goal of Mbovpan is to help researchers to study the M. bovis pangenome in an automatic and easy way.
This is a nextflow pipeline for variant calling of low frequency variants in panel/WES high-throughput data.
A bioinformatics pipeline that automates the Sanger amplicon sequencing data analysis of thousands of samples in parallel.
Add a description, image, and links to the nextflow-pipeline topic page so that developers can more easily learn about it.
To associate your repository with the nextflow-pipeline topic, visit your repo's landing page and select "manage topics."