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How to draw figure 4d in your paper #41

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gynecoloji opened this issue Sep 6, 2020 · 2 comments
Open

How to draw figure 4d in your paper #41

gynecoloji opened this issue Sep 6, 2020 · 2 comments
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documentation Improvements or additions to documentation

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@gynecoloji
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I do not know how you drew the figure 4d in your paper. Because I did not find any tutorials in your github about it.
CellChat is a very good R package but it is a little difficult for me to understand the structure of the cellchat object.
For example, when I look at Tgfb1-(Tgfbr1 + Tgfbr2), I do not know which group of cells are receivers and which group of cells are senders.
Could you please give me some clarification about them at your earliest convenience?

@sqjin
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sqjin commented Sep 6, 2020

@gynecoloji Please check the previous issue #14 . CellChat uses adjacent matrix for representing the connections, with each row representing sources and column representing targets.

@gynecoloji
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Thank you very much!

@sqjin sqjin added the documentation Improvements or additions to documentation label Oct 7, 2020
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