Skip to content
This repository has been archived by the owner on Jan 24, 2024. It is now read-only.

Issues: sqjin/CellChat

441 Open 286 Closed
441 Open 286 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Question on calculation of interaction probability
#287 opened Sep 13, 2021 by lucyu2668
1
Error when using netVisual_embeddingZoomIn with merged object
#286 opened Sep 10, 2021 by ccruizm
5
No significant signaling interactions are inferred based on the input!
#285 opened Sep 9, 2021 by GouQiao
2
All the runs produced an error:
#284 opened Sep 6, 2021 by charlesgwellem
3
netVisual_bubble error
#283 opened Sep 3, 2021 by hahia
1
plotGeneExpression add legend
#282 opened Sep 3, 2021 by hahia
2
Error in genes.de[[i]] : subscript out of bounds
#281 opened Sep 1, 2021 by deb0612
10
Add axis text colors in netVisual_bubble function
#280 opened Aug 31, 2021 by Tomer9w
1
add new ligand-protein interaction suggestion
#279 opened Aug 29, 2021 by JiaruiMi
1
ERROR cellchat <- netClustering(cellchat, type = "functional")
#278 opened Aug 29, 2021 by wangkpro
2
Suggestion on shortlisting down-regulated pathways
#277 opened Aug 28, 2021 by Manikgarg
1
Filter interactions based on a min umi count
#276 opened Aug 24, 2021 by TapsiS
Using population.size parameter
#275 opened Aug 23, 2021 by ccruizm
1
Suggestion: Circle plot for null interactions suggestion
#273 opened Aug 21, 2021 by tsengpy
1
Some cells do not show up on the outgoing but not on the incoming river plots.
#272 opened Aug 18, 2021 by charlesgwellem
1
netVisual_embeddingPairwise: error due to handling of 'pathway.remove'
#270 opened Aug 17, 2021 by ktessema
4
Arrow missing from netVisual_chord_gene
#266 opened Aug 15, 2021 by aaronkwong
6
A problem with a error message in identifyOverExpressedGenes in CellChat. bug Something isn't working
#264 opened Aug 11, 2021 by weichloe
9
Error in computeCommunProb
#263 opened Aug 11, 2021 by daxianghuibian
10
Updating CellChatDB by adding ligand-receptor pairs from OmniPath
#260 opened Aug 9, 2021 by superman2412
3
error reporting for rankSimilarity
#259 opened Aug 7, 2021 by zh-zhang1984
8
Chord diagram issue: track index
#258 opened Jul 30, 2021 by jerrbearo
8
computeCommunProb :Error in data.use[RsubunitsV, ]
#257 opened Jul 30, 2021 by alhadjil
6
netAnalysis_river for subset of pathways and order them based on similarity
#255 opened Jul 27, 2021 by jv-20
2
CellChat Visualization between specified sources and targets
#253 opened Jul 23, 2021 by flolesage
3
ProTip! Find all open issues with in progress development work with linked:pr.