Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

pp.highly_variable_genes handles subset and inplace consistently #2757

Merged
merged 16 commits into from
Dec 4, 2023
Merged

pp.highly_variable_genes handles subset and inplace consistently #2757

Changes from 1 commit
Commits
Show all changes
16 commits
Select commit Hold shift + click to select a range
c3508cd
start to work on fix
eroell Nov 15, 2023
0f480e7
minor test update
eroell Nov 16, 2023
2cab336
remove comments
eroell Nov 16, 2023
33f057c
updated test
eroell Nov 16, 2023
4cbaecb
clean up new test
eroell Nov 16, 2023
21099f6
remove helper file
eroell Nov 16, 2023
cc6eb99
release notes
eroell Nov 16, 2023
6b9a162
remove seurat_v3 due to missing scikit-misc
eroell Nov 16, 2023
0836c12
Merge branch 'master' into hvg-subset-inplace
flying-sheep Nov 17, 2023
12a8d27
fmt
eroell Nov 23, 2023
2b0ec32
Merge branch 'hvg-subset-inplace' of github.com:eroell/scanpy into hv…
eroell Nov 23, 2023
f9a5726
tersify
flying-sheep Nov 23, 2023
cf8ddea
precedence
flying-sheep Nov 23, 2023
dca7bfb
smaller dummy dataset
eroell Dec 1, 2023
d77fc7f
merged and updated
eroell Dec 1, 2023
ac419a2
Merge branch 'master' into hvg-subset-inplace
eroell Dec 1, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Prev Previous commit
Next Next commit
release notes
  • Loading branch information
@eroell
eroell committed Nov 16, 2023
commit cc6eb99379b20a22dfb97814e3ab2719d6d7bf6b
1 change: 1 addition & 0 deletions docs/release-notes/1.9.7.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -5,3 +5,4 @@
- Fix handling of numpy array palettes (e.g. after write-read cycle) {pr}`2734` {smaller}`P Angerer`
- Specify correct version of `matplotlib` dependency {pr}`2733` {smaller}`P Fisher`
- Fix {func}`scanpy.pl.violin` usage of `seaborn.catplot` {pr}`2739` {smaller}`E Roellin`
- Fix {func}`scanpy.pp.highly_variable_genes` to handle the combinations of `inplace` and `subset` consistently {pr}`2757` {smaller}`E Roellin`
Loading