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Issues list

Kallisto don't show up in Activity Monitor but is top
#348 opened Jun 30, 2022 by BenjaminDEMAILLE
1
kallisto_linux-v0.48.0.tar.gz: "GLIBCXX_3.4.20 not found" failure on CentOS 7.9
#347 opened Jun 14, 2022 by HenrikBengtsson
Request: Document est_counts in manual
#346 opened May 5, 2022 by outpaddling
Suggestion: verify input for kallisto index
#345 opened Apr 12, 2022 by anmej
Mapping Sample Tags to Cellular Barcodes
#343 opened Mar 24, 2022 by ahmadalajami
5
Running kallisto(bustools) on amplicon-based (targeted panel) BD Rhapsody scRNA-seq data
#342 opened Feb 28, 2022 by ahmadalajami
10
running kallisto quant with custom target gene's index
#341 opened Feb 23, 2022 by mjko1210
1
Invalid segment Error when building reference of the rat genome
#340 opened Feb 5, 2022 by kim-fehl
3
Multimapping reads in Kallisto
#339 opened Jan 31, 2022 by kikegoni
2
eQTLs
#337 opened Jan 17, 2022 by afadda1
allele-specific expression
#335 opened Jan 11, 2022 by afadda1
2
Does -gtf support gff3?
#332 opened Nov 24, 2021 by outpaddling
4
Are some cDNAs omitted from the kallisto index?
#324 opened Sep 24, 2021 by jamesboot
12
How to construct and index file with extended TTS
#322 opened Aug 18, 2021 by bweatherbee
1
Count matrix with and without lammano workflow
#318 opened Aug 5, 2021 by njbernstein
3
failed to build code
#303 opened Apr 9, 2021 by FabianaRossi
7
Account for coverage non-uniformity between exons (Exome-capture RNAseq)
#300 opened Mar 25, 2021 by avkitex
Error: unspliced. bus has no BUS records
#298 opened Feb 25, 2021 by gabriellayi
2
kallisto bus on SMART-seq3 data
#297 opened Feb 24, 2021 by winni2k
8
Recommendation for paired-end reads associated with a single-end file
#296 opened Feb 22, 2021 by smoretti
Kallisto: Estimated average fragment length is zero
#295 opened Feb 18, 2021 by Jayesh-Kumar-Sundaram
TPM value differ greatly!
#294 opened Jan 20, 2021 by YichaoOU
Kallisto takes a lot of time for some small size libraries
#293 opened Jan 19, 2021 by smoretti
1
Kallisto's results are weird
#292 opened Jan 14, 2021 by jinghui1012
Kallisto generate empty matrix for spliced and unspliced annotation RNA velocity
#291 opened Dec 5, 2020 by rdesantis-git
ProTip! no:milestone will show everything without a milestone.