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Incompatible indices error message seems to refer to incorrect version numbers
#400
opened Sep 25, 2023 by
jdreyf
updated Sep 25, 2023
Kallisto not able to find the index file or abundance.tsv
#397
opened Sep 9, 2023 by
swinnier
updated Sep 11, 2023
Feature request: Add support for xz and zstd
#383
opened Jun 21, 2023 by
outpaddling
updated Jun 21, 2023
Can't Bootstrap even after attempts to compile with cmake
#382
opened Jun 1, 2023 by
sikayler
updated Jun 2, 2023
Kallisto takes a lot of time for some small size libraries
#293
opened Jan 19, 2021 by
smoretti
updated Apr 14, 2023
Are some cDNAs omitted from the kallisto index?
#324
opened Sep 24, 2021 by
jamesboot
updated Mar 16, 2023
Why is there a big difference between kallisto and cellranger count result?
#376
opened Feb 17, 2023 by
aizhimin
updated Mar 14, 2023
Is it possible to create a pseudobam file with kallistobustools (kb)?
#375
opened Jan 24, 2023 by
ahmadalajami
updated Feb 9, 2023
No bus file created when no reads are pseudoaligned
#374
opened Jan 16, 2023 by
pmelsted
updated Jan 16, 2023
Request: documentation of required gtf format for kallisto quant --genomebam option
#368
opened Dec 9, 2022 by
SolKatzman
updated Dec 28, 2022
genomebam produces erroneous output for minus strand exons depending on order in gtf file
#372
opened Dec 26, 2022 by
SolKatzman
updated Dec 26, 2022
genomebam processing does not check for missing transcript_id
#371
opened Dec 26, 2022 by
SolKatzman
updated Dec 26, 2022
genomebam header does not contain sort_order value SO nor command_line CL
#370
opened Dec 26, 2022 by
SolKatzman
updated Dec 26, 2022
Request: clarification of interaction between quant options --pseudobam and --genomebam
#367
opened Dec 9, 2022 by
SolKatzman
updated Dec 9, 2022
libc++abi: terminating with uncaught exception of type std::length_error: vector/ using loompy to make loom file from fastq
#365
opened Nov 30, 2022 by
chousiniyade
updated Dec 4, 2022
Can kallisto run on a personal laptop?
#360
opened Oct 24, 2022 by
iamgiddyaboutgit
updated Nov 10, 2022
droplet RNAseq data analysis using Kallisto Bustools
#357
opened Sep 8, 2022 by
satyam-espci
updated Sep 9, 2022
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