Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

enable building kallisto without HDF5 #97

Open
mschilli87 opened this issue Jan 5, 2016 · 1 comment
Open

enable building kallisto without HDF5 #97

mschilli87 opened this issue Jan 5, 2016 · 1 comment

Comments

@mschilli87
Copy link

Since HDF5 seems to cause several unresolved issues (#58, #79 , #82, ...?) and it doesn't seem essential for kallisto's core functionality (using the --plaintext option) it might be worthwhile to offer a build flag disabling the HDF5 related parts of kallisto allowing to build a --plaintext-only version that does not depend on HDF5 at all. This would offer a clean solution for everybody who cannot use the pre-complied binaries and doesn't need HDF5 output.

@mschilli87
Copy link
Author

This could also help resolving (part of) #112.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant