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./kallisto: error while loading shared libraries: libhdf5.so.7: cannot open shared object file: #79
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Thanks for the fix @stephenturner, I had this same issue when building Kallisto into a Docker container. |
I also built |
I just had this problem (08-2017, more recent hdf5 version involved) and I thought that if I remove and install again kallisto, it should use the hdf5 currently installed in my system, which wasn't the version kallisto was expecting. That worked and the problem was fixed. |
I built HDF5 as instructed, (but not in my home directory). Added the
lib
directory toLD_LIBRARY_PATH
.Running kallisto gives me the error
./kallisto: error while loading shared libraries: libhdf5.so.7: cannot open shared object file: No such file or directory
I solved this by going into
/path/to/hdf5-1.8.15-patch1/lib
and runningln -s libhdf5.so libhdf5.so.7
. Not sure if others have experienced this, but this worked for me.The text was updated successfully, but these errors were encountered: