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Issues: microsoft/InnerEye-DeepLearning

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Issues list

Modify package such that scripts are available as commandline tools
#18 opened Jun 11, 2020 by ant0nsc
Store number of trainable parameters in config for later use architecture Anything around possible extensions or re-structuring of code
#165 opened Aug 7, 2020 by ant0nsc
Clean up spurious module loading errors
#203 opened Sep 7, 2020 by ant0nsc
For segmentation models, adapt crop_size, inference_crop_size and stride automatically based on the GPUs available.
#207 opened Sep 9, 2020 by javier-alvarez
Data augmentation
#226 opened Sep 17, 2020 by javier-alvarez
Enable monitor.py on local runs?
#236 opened Sep 22, 2020 by ant0nsc
Create a small public example repository for use via submodules
#237 opened Sep 22, 2020 by ant0nsc
Make HDF5 codepaths consistent across segmentation and classification architecture Anything around possible extensions or re-structuring of code
#298 opened Oct 26, 2020 by ant0nsc
Patch visualization: Highlight that areas that are never sampled good first issue Good for newcomers not urgent Not needed for current work reporting and diagnostics Improvements to diagnostics and reporting
#301 opened Oct 28, 2020 by ant0nsc
Sample task and documentation for finetuning models documentation Improvements or additions to documentation question Further information is requested
#310 opened Nov 4, 2020 by Shruthi42
Disentangle metrics reporting for ensemble runs reporting and diagnostics Improvements to diagnostics and reporting
#329 opened Nov 25, 2020 by ant0nsc
Can we reduce memory consumption by storing segmentation labels as class indices, not one-hot?
#338 opened Dec 10, 2020 by ant0nsc
Clean up the logic behind minimum image size and padding for segmentation models
#343 opened Dec 21, 2020 by ant0nsc
Check if AzureML's compute target "local" works workflow Improvements to workflows (recovery, speed)
#349 opened Jan 4, 2021 by ant0nsc
Model comparision should report what datasets are used for comparision reporting and diagnostics Improvements to diagnostics and reporting
#359 opened Jan 13, 2021 by javier-alvarez
Better diagnostics: Regression error plots feature parity Reach feature parity with code before Lightning move not urgent Not needed for current work reporting and diagnostics Improvements to diagnostics and reporting
#375 opened Jan 28, 2021 by ant0nsc Feature parity after Lightning refactoring
Add test coverage for in-situ cross validation with multiple GPUs architecture Anything around possible extensions or re-structuring of code
#376 opened Jan 28, 2021 by ant0nsc
Try to increase crop size for Prostate and H&N model
#387 opened Feb 3, 2021 by ant0nsc
Add support for model finetuning
#390 opened Feb 5, 2021 by Shruthi42
1
Add vulture to find dead code in the PR checks
#434 opened Apr 13, 2021 by javier-alvarez
Enable multi-class classification
#443 opened Apr 21, 2021 by melanibe
Can we retire the restrict_subjects flag and replace with PL's debug flags?
#448 opened Apr 29, 2021 by ant0nsc
Allow batch sizes > 1 for classification model inference.
#453 opened May 4, 2021 by Shruthi42
1
Refactor the data loaders in the InnerEye ScalarModel to enable re-use
#461 opened May 19, 2021 by ant0nsc
Benchmark the evaluation of a segmentation model on a full test set image not urgent Not needed for current work
#479 opened Jun 7, 2021 by ant0nsc
1
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