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Issues: microsoft/InnerEye-DeepLearning

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Issues list

Reference runs for HeadAndNeck and Prostate model are not the latest bug Something isn't working
#733 opened May 27, 2022 by ant0nsc
1 task done
Improve documentation for model comparison documentation Improvements or additions to documentation
#732 opened May 27, 2022 by ant0nsc
1 task done
Extend submit_for_inference to work correctly with hi-ml as submodule
#694 opened Mar 10, 2022 by ant0nsc
Move SSL models to HI-ML and delete from InnerEye
#691 opened Mar 9, 2022 by ant0nsc
Test-requirements.txt uses differnt version of pl-bolts than main environment
#685 opened Mar 3, 2022 by ant0nsc
Enable the new recovery functionality of PL 1.5
#627 opened Jan 5, 2022 by ant0nsc
1
@ant0nsc
1
Dataset mounting on local VMs points to wrong folders
#624 opened Dec 15, 2021 by ant0nsc
@ant0nsc
1
Deleting folders from job output can cause trouble with hosttools
#610 opened Dec 7, 2021 by ant0nsc
SSL: What are the newest/best SSL implementations that are available?
#600 opened Dec 1, 2021 by ant0nsc
SSL: Enable custom transformations that extend the present set of transformations
#598 opened Dec 1, 2021 by ant0nsc
1
SSL: metadata is removed and not fully available in training_step methods
#597 opened Dec 1, 2021 by ant0nsc
Check consistency of SSL metrics on multiple nodes
#595 opened Nov 24, 2021 by ant0nsc
@ant0nsc
Multi-GPU jobs don't terminate when one worker fails
#590 opened Nov 17, 2021 by ant0nsc
Retire run recovery ID, replace with RunID good first issue Good for newcomers
#571 opened Sep 30, 2021 by ant0nsc
@peterhessey
We have a field "recovery_start_epoch" in deep_learning_config that can probably be retired good first issue Good for newcomers not urgent Not needed for current work
#570 opened Sep 30, 2021 by ant0nsc
@peterhessey
Jobs file when they get pre-empted after uploading files
#568 opened Sep 27, 2021 by ant0nsc
1
@JonathanTripp
Add file synchronization support for multiple nodes
#551 opened Aug 6, 2021 by ant0nsc
@Shruthi42
2
Run recovery for hyperdrive runs does not work
#538 opened Jul 13, 2021 by ant0nsc
Print all package versions at start of trainer for diagnostics reporting and diagnostics Improvements to diagnostics and reporting
#530 opened Jul 6, 2021 by ant0nsc
@peterhessey
1
Add a "download files" script that recognizes patterns usage blocker Bugs that block InnerEye users
#524 opened Jul 6, 2021 by ant0nsc
@peterhessey
2
Add documentation for starting training with initialized weights documentation Improvements or additions to documentation
#523 opened Jul 6, 2021 by ant0nsc
@peterhessey
1
Aggregate SoftDice loss for segmentation models over all GPUs
#504 opened Jun 22, 2021 by ant0nsc
1
@ant0nsc
Design a generic way of model comparison also for container models
#487 opened Jun 9, 2021 by ant0nsc
Benchmark the evaluation of a segmentation model on a full test set image not urgent Not needed for current work
#479 opened Jun 7, 2021 by ant0nsc
1
Refactor the data loaders in the InnerEye ScalarModel to enable re-use
#461 opened May 19, 2021 by ant0nsc
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