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Clean up the logic behind minimum image size and padding for segmentation models #343

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ant0nsc opened this issue Dec 21, 2020 · 0 comments

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ant0nsc commented Dec 21, 2020

We presently check that all images have at least a minimum image size dictated by the UNet architecture. Nevertheless, we later have padding enabled if an image is below the required patch size.
This should be cleaned up:

  • If there is no padding, training on too small images should fail.
  • If there is padding, training on too small images should print a warning, and then go on training (verify that this is really the case)
  • Discuss what the right strategy is for testing on too small images.

AB#3904

@ant0nsc ant0nsc added no changelog needed CHANGELOG.md does not need to be updated in this PR and removed no changelog needed CHANGELOG.md does not need to be updated in this PR labels Apr 9, 2021
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