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Issues list

New link for TAIR data bug (B: affects usability)
#2331 opened May 17, 2024 by pgaudet updated Jul 1, 2024
9
gorule-0000027 misses some invalid ID in the with/field annotation rule
#2063 opened Sep 6, 2023 by pgaudet updated Jun 3, 2024
9
Create a GPAD2.0 test file annotation rule
#2241 opened Feb 20, 2024 by pgaudet updated May 29, 2024
@mugitty @LiNiMGI
6
Implement gorule-0000022 QC check for annotations to retracted publications annotation rule revisit
#676 opened Jun 6, 2018 by pgaudet updated May 29, 2024
@pgaudet
40
New GORULE to filter GO-OWL annotations annotation rule
#2328 opened May 13, 2024 by pgaudet updated May 13, 2024
New GO rule to validate entities with upstream's GPI files annotation rule
#2305 opened Apr 29, 2024 by pgaudet updated May 1, 2024
New gorule: check that the file headers are according to spec annotation rule
#2290 opened Apr 8, 2024 by pgaudet updated Apr 8, 2024
3 tasks
@pgaudet
Spec out gorule-0000051 : binding and protein binding need 'with' (or extension) annotation rule
#2058 opened Aug 31, 2023 by pgaudet updated Mar 28, 2024
@pgaudet
7
Fix Rules display so that labels and headers are fixed
#2270 opened Mar 25, 2024 by pgaudet updated Mar 25, 2024
1
New gorule-0000048: If the annotation has the ND evidence code check whether any manual annotations in the same GO category as the supplied term already exist for this gene product annotation rule revisit
#914 opened Nov 8, 2018 by pgaudet updated Feb 9, 2024
4
gorule-0000013 not filtering out IEA annotations annotation rule
#2224 opened Feb 8, 2024 by pgaudet updated Feb 8, 2024
1
gorule-0000027 must check that DBs are in the db-xref file and use the 'name' field annotation rule
#2210 opened Dec 15, 2023 by pgaudet updated Jan 11, 2024
1 of 12 tasks
@mugitty
2
Update gorule-0000037 : switched back to GO_REF:0000033
#2185 opened Nov 21, 2023 by pgaudet updated Jan 9, 2024
@pgaudet
7
New gorule-0000045: With/from: Verify that the combination of evidence (ECO) codes conform to the rules in eco-usage-constraints.yaml annotation rule
#908 opened Nov 8, 2018 by pgaudet updated Jan 8, 2024
2
GO rules reports - notifications action item from 2018-10 Montreal GOC mtg annotation rule
#940 opened Nov 29, 2018 by pgaudet updated Jan 8, 2024
3
Restore and update PAINT GOREF
#2131 opened Oct 24, 2023 by pgaudet updated Nov 14, 2023
@pgaudet
4
Do not annotate terms annotation rule
#2107 opened Nov 6, 2018 by pgaudet updated Oct 13, 2023
@pgaudet
1
Review NOT annotations with an extension annotation rule
#2109 opened Mar 22, 2019 by pgaudet updated Oct 12, 2023
4
Create new rule to prevent propagation of certain terms by orthology/similarity annotation rule
#2106 opened Nov 24, 2017 by pgaudet updated Oct 12, 2023
@pgaudet
3
HTP-types will not be allowed as evidence for ISS+ISO annotation rule
#2105 opened Oct 17, 2017 by pgaudet updated Oct 12, 2023
3
gorule-0000007 Shared Annotation Matrix: provide documentation action item from 2018-10 Montreal GOC mtg annotation rule
#942 opened Nov 29, 2018 by pgaudet updated Sep 28, 2023
@kltm
12
Need to run checks (GORULES) on 'goa_uniprot_all_noiea' data annotation rule bug (B: affects usability)
#1102 opened Jun 11, 2019 by pgaudet updated Sep 26, 2023
7
Check valid taxa when parsing data (GAF column 13; GPI column 7) annotation rule bug (A: showstopper)
#2061 opened Sep 4, 2023 by pgaudet updated Sep 22, 2023
@dustine32 @pgaudet @mugitty
5
EBI-GOA to generate since GAF & GPAD & GPI files for each species enhancement
#1521 opened Jun 24, 2020 by pgaudet updated Jul 26, 2023
@alexsign
4
Review all GO rules annotation rule
#2022 opened Jun 20, 2023 by pgaudet updated Jun 29, 2023
@pgaudet
1
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