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Issues list

Dataprovider - get canonical / MANE transcript enhancement New feature or request keep alive exempt issue from staleness checks
#747 opened Aug 5, 2024 by davmlaw
2
Context view improvements enhancement New feature or request
#741 opened Jun 10, 2024 by andreasprlic
1
3
Support transcript identifiers (in parentheses) in variants keep alive exempt issue from staleness checks
#735 opened Apr 10, 2024 by marius-mather
1
CDS phase (frame offset for eg ribo slippage) not taken into account in amino acid translation bug Something isn't working data provider schema change
#732 opened Mar 13, 2024 by davmlaw
p type cannot be validated bug Something isn't working
#727 opened Feb 7, 2024 by markgene
1
Modify parser to include common errors to provide better error messages than "syntax error" keep alive exempt issue from staleness checks
#720 opened Jan 25, 2024 by davmlaw
3
c_to_p at intron/exon boundary where splice region is preserved keep alive exempt issue from staleness checks
#714 opened Dec 19, 2023 by b0d0nne11
1
3
Consider exposing a utility for converting between g. variants by leveraging pyliftover enhancement New feature or request keep alive exempt issue from staleness checks
#711 opened Nov 17, 2023 by mihaitodor
6
How to properly handle selenoproteins keep alive exempt issue from staleness checks
#710 opened Nov 10, 2023 by holtgrewe
3
Validation - refactor to be able to retrieve all errors rather than throw exception on 1st enhancement New feature or request keep alive exempt issue from staleness checks
#706 opened Oct 9, 2023 by davmlaw
5
Normalizer.normalize() is performing sequence position validation which cannot be skipped keep alive exempt issue from staleness checks
#705 opened Oct 9, 2023 by mihaitodor
4
Exon boundary / intron validation - need for genome build specific validation? data provider schema change enhancement New feature or request keep alive exempt issue from staleness checks
#700 opened Sep 28, 2023 by davmlaw
4
Update / modernize packaging keep alive exempt issue from staleness checks
#691 opened Sep 14, 2023 by reece
4
mitochondria (m.) assembly mapping keep alive exempt issue from staleness checks
#663 opened Jul 5, 2023 by davmlaw
7
Inconsistencies across intron/exon boundaries keep alive exempt issue from staleness checks
#655 opened May 23, 2023 by cassiemk
2
6
Support for circular genomic identifiers keep alive exempt issue from staleness checks
#650 opened Apr 3, 2023 by mbiokyle29
4
Support transcript variants with specification of underlying genomic reference keep alive exempt issue from staleness checks
#642 opened Sep 30, 2022 by reece
4
How to apply a protein change to a given amino acid sequence to produce a mutant amino acid sequence keep alive exempt issue from staleness checks
#641 opened Jun 24, 2022 by nh13
10
Making seqrepo optional
#624 opened Sep 23, 2021 by kislyuk 1.6
2
Index Error for variant using am37.c_to_g() bug Something isn't working
#606 opened Jul 30, 2020 by sptaylor
7
Support for wildcards lost in the newer versions of hgvs? bug Something isn't working
#595 opened Apr 9, 2020 by melissacline
1
move SequenceVariant.fill_ref() to separate module keep alive exempt issue from staleness checks
#593 opened Mar 25, 2020 by reece
4
AttributeError: 'AARefAlt' object has no attribute 'ref_n' bug Something isn't working
#573 opened Oct 30, 2019 by EnriqueDMeneses
1
Streamline testing
#551 opened Feb 24, 2019 by reece
1 of 3 tasks
1.6
make tests to run through jupyter notebooks
#542 opened Dec 19, 2018 by Deena-B 1.6
1
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