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pyPESTO v0.5.2

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@PaulJonasJost PaulJonasJost released this 31 May 13:27
v0.5.2
d38005e
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Learn about vigilant mode.
  • New Feature: Variational inference with PyMC (#1306)
  • PEtab
    • Import of petab independent of amici (#1355)
  • Problem
    • Added option to sample startpoints for a problem, from the problem directly. (#1364)
    • More detailed defaults for problem.get_full_vector (#1393)
    • Save pypesto and python version to the problem. (#1382)
  • Objective
    • Fix calling priors in sampling with fixed parameters (#1378)
    • Fix JaxObjective (#1400)
  • Optimize
    • ESS optimizers: suppress divide-by-zero warnings; report n_eval (#1380)
    • SacessOptimizer: collect worker stats (#1381)
    • Add load method to Hdf5AmiciHistory (#1370)
  • Hierarchical
    • Relative: fix log of zero for default 0 sigma values (#1377)
  • Sample
    • Fix pypesto.sample.geweke_test.spectrum for nfft<=3 (#1388)
  • Visualize
    • Handle correlation plot with nans (#1365)
  • General
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