Commits

Commits on Feb 13, 2024

Updating to samtools v1.19.2 (nf-core#4907 )
asp8200
committedFeb 13, 2024

Commits on Feb 12, 2024

Adding support for apptainer in Sentieon modules (nf-core#4893 )
asp8200
committedFeb 12, 2024

Commits on Nov 23, 2023

Updating to sentieon to v202308.01 (nf-core#4369 )
asp8200
committedNov 23, 2023

Commits on Nov 21, 2023

More bioconda sentieon (nf-core#4357 )
asp8200
committedNov 21, 2023

Commits on Nov 16, 2023

Adding fix for LD_LIBRARY_PATH in singularity mode (nf-core#4347 )

committedNov 16, 2023

Commits on Oct 29, 2023

Sentieon/tnfilter (nf-core#4208 )
asp8200
committedOct 29, 2023

Commits on Oct 19, 2023

Adding intervals to sentieon driver cmd (nf-core#4160 )
asp8200
committedOct 19, 2023

Commits on Oct 13, 2023

module for Sentieon tnhaplotyper2 (nf-core#3865 )
asp8200
committedOct 13, 2023

Commits on Sep 12, 2023

Setting temp-dir for BCFTOOLS_SORT (nf-core#3832 )
asp8200
committedSep 12, 2023

Commits on Sep 5, 2023

sentieon/dnascope : Handling args (nf-core#3811 )
asp8200
committedSep 5, 2023

Commits on Sep 4, 2023

Update sentieon dnascope (nf-core#3790 )

asp8200
and
ramprasadn
committedSep 4, 2023

Commits on Aug 22, 2023

Adding stubs to three Sentieon modules (nf-core#3776 )
asp8200
committedAug 22, 2023

Commits on Aug 11, 2023

Move conda-checks (seventh batch) (nf-core#3723 )
asp8200
committedAug 11, 2023

Commits on Aug 10, 2023

Move conda-checks (sixth batch) (nf-core#3713 )
asp8200
committedAug 10, 2023
Adding extra meta-fields for sentieon/dedup (nf-core#3718 )
asp8200
committedAug 10, 2023
Adding extra meta-fields for sentieon/bwamem (nf-core#3717 )
asp8200
committedAug 10, 2023
Adding extra meta-fields for sentieon/applyvarcal (nf-core#3716 )
asp8200
committedAug 10, 2023

Commits on Aug 9, 2023

Move conda-checks (fifth batch) (nf-core#3704 )
asp8200
committedAug 9, 2023

Commits on Aug 8, 2023

Updating output-prefix for sentieon-bwaindex (nf-core#3708 )
asp8200
committedAug 8, 2023

Commits on Aug 7, 2023

Move conda-checks (fourth batch) (nf-core#3694 )

asp8200
and
adamrtalbot
committedAug 7, 2023

Commits on Aug 5, 2023

Updating multiqc to v1.15 (nf-core#3701 )
asp8200
committedAug 5, 2023

Commits on Aug 3, 2023

Move conda-checks (second batch) (nf-core#3690 )
asp8200
committedAug 3, 2023
Move conda-checks (third batch) (nf-core#3692 )
asp8200
committedAug 3, 2023

Commits on Aug 2, 2023

Move conda-checks (first batch) (nf-core#3686 )
asp8200
committedAug 2, 2023

Commits on Jul 23, 2023

Update tiddit to v3.6.1 (nf-core#3663 )
asp8200
committedJul 23, 2023

Commits on Jul 4, 2023

License on sentieon script (nf-core#3594 )
asp8200
committedJul 4, 2023

Commits on Jun 21, 2023

Sentieon dedup metrics tsv (nf-core#3541 )
asp8200
committedJun 21, 2023

Commits on Jun 7, 2023

Update sentieon modules (nf-core#3494 )
asp8200
committedJun 7, 2023

Commits on May 24, 2023

Sentieon applyvarcal module (nf-core#3448 )
asp8200
committedMay 24, 2023

Commits on May 23, 2023

Sentieon VarCal (nf-core#3446 )
asp8200
committedMay 23, 2023

Commits on May 22, 2023

Module for Sentieons gvcftyper (nf-core#3440 )
asp8200
committedMay 22, 2023

Commits on Apr 24, 2023

Improving Sentieon-dedup-module (nf-core#3315 )
asp8200
committedApr 24, 2023

Commits on Apr 11, 2023

Sentieon haplotyper module (nf-core#3232 )

asp8200
and
maxulysse
committedApr 11, 2023

Commits on Mar 30, 2023

Sentieon dedup (nf-core#3224 )

asp8200
and
maxulysse
committedMar 30, 2023

Commits on Mar 27, 2023

Sentieon bwa mem (nf-core#2905 )

asp8200
and
maxulysse
committedMar 27, 2023