scikit-learn: machine learning in Python

Certbot is EFF's tool to obtain certs from Let's Encrypt and (optionally) auto-enable HTTPS on your server. It can also act as a client for any other CA that uses the ACME protocol.

Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials,…

A code-completion engine for Vim

Data Apps & Dashboards for Python. No JavaScript Required.

Open source code for AlphaFold.

Always know what to expect from your data.

Image processing in Python

The Web API toolkit. 🛠

Pythonic task management & command execution.

Main repository for Vispy

File support for asyncio

Gaussian processes in TensorFlow

Geographic add-ons for Django REST Framework. Maintained by the OpenWISP Project.

Scripts to download genomes from the NCBI FTP servers

scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

Performant Pythonic GenomicRanges

python Circos

Tool to plot synteny and structural rearrangements between genomes

Bayesian Optimization using GPflow

A genome visualization python package for comparative genomics

Population-scale genomics

Scripts needed to support Trackography project

Graph based multi genome aligner

Bioinformatics tool outputs converter to JSON or YAML

strain-level analysis tools

Python library to visualize circular plasmid maps

JD website