JP6634554B2 - Fgf2に対するアプタマー及びその使用 - Google Patents
Fgf2に対するアプタマー及びその使用 Download PDFInfo
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- JP6634554B2 JP6634554B2 JP2016510402A JP2016510402A JP6634554B2 JP 6634554 B2 JP6634554 B2 JP 6634554B2 JP 2016510402 A JP2016510402 A JP 2016510402A JP 2016510402 A JP2016510402 A JP 2016510402A JP 6634554 B2 JP6634554 B2 JP 6634554B2
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- aptamer
- fgf2
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- ribose
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Description
FGF2は間葉系細胞を刺激してPDGFやPDGFR、VEGF、HGF等の炎症性サイトカインや増殖因子の発現を亢進させると共に、血管新生を促進し、骨破壊を促す。すなわちFGF2は、慢性関節リウマチにおける重要な病態に関与する中心的分子であることがわかっている(非特許文献1参照)。
FGF2の機能を制御する事ができれば、破骨細胞の活性化を介した関節破壊の治療薬としての効果も十分期待できると考えられ、実際に抗FGF2中和抗体をAIAモデルラットの関節に直接投与して症状が緩和することが知られている。しかしながらその発症の抑制効果はわずかであり、特に発症後の投与における治癒効果は確認されていない(非特許文献5)。
[1]下式(1)で表わされるヌクレオチド配列(但し、ウラシルはチミンであってもよい)を含むアプタマーであって、以下(a)又は(b)のいずれかである、FGF2に結合するアプタマー:
N1GGAN2ACUAGGGCN3UUAAN4GUN5ACCAGUGUN6(式1)
N1及びN6は、それぞれ独立して任意の0から数個の塩基、
N2、N3、N4及びN5は、独立して任意の一個の塩基を表す、
(a)該アプタマーに含まれるヌクレオチドにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位がフッ素原子であり、
(ii)各プリンヌクレオチドのリボースの2’位がヒドロキシ基である、アプタマー;
(b)該(a)のアプタマーにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位のフッ素原子が、それぞれ独立して、無置換であるか、水素原子、ヒドロキシ基及びメトキシ基からなる群より選ばれる原子又は基で置換されており、
(ii)各プリンヌクレオチドのリボースの2’位のヒドロキシ基が、それぞれ独立して、無置換であるか、水素原子、メトキシ基及びフッ素原子からなる群より選ばれる原子又は基で置換されている、アプタマー。
[2]N1は、G、GG、AG、C又はギャップ、
N2は、A又はU、
N3は、G、C又はA、
N4は、G、C又はU、
N5は、G又はU、
N6は、UUCN61又はAGUCN62
N61及びN62は、それぞれ独立して任意の0から数個の塩基である、
[1]記載のアプタマー。
[3]下式(2)又は(3)で表わされるヌクレオチド配列を含む、[1]又は[2]記載のアプタマー:
GGGAAACUAGGGCGUUAACGUGACCAGUGUUUCN61(式2)
N1GGAUACUAGGGCAUUAAUGUUACCAGUGUAGUCN62(式3)。
[4]配列番号2又は7で表わされるヌクレオチド配列を含む、[1]〜[3]のいずれかに記載のアプタマー。
[5]配列番号1、3、4、5、6、8、10又は11で表わされるヌクレオチド配列を含む、[1]〜[3]のいずれかに記載のアプタマー。
[6][1]〜[5]のいずれかに記載のアプタマーにおいて、1又は数個のヌクレオチドが置換、欠失、挿入又は付加されたヌクレオチド配列を含むアプタマーであって、
(a)該アプタマーに含まれるヌクレオチドにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位がフッ素原子であり、
(ii)各プリンヌクレオチドのリボースの2’位がヒドロキシ基である、アプタマー;
(b)該(a)のアプタマーにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位のフッ素原子が、それぞれ独立して、無置換であるか、水素原子、ヒドロキシ基及びメトキシ基からなる群より選ばれる原子又は基で置換されており、
(ii)各プリンヌクレオチドのリボースの2’位のヒドロキシ基が、それぞれ独立して、無置換であるか、水素原子、メトキシ基及びフッ素原子からなる群より選ばれる原子又は基で置換されている、アプタマー。
[7]ヌクレオチドの長さが45ヌクレオチド以下である、[1]〜[6]のいずれかに記載のアプタマー。
[8]FGF2とFGF受容体との結合を阻害する、[1]〜[7]のいずれかに記載のアプタマー。
[9]少なくとも1つのヌクレオチドが修飾されている、[1]〜[8]のいずれかに記載のアプタマー。
[10][1]〜[9]のいずれかに記載のアプタマー及び機能性物質を含む複合体。
[11]機能性物質が、親和性物質、標識用物質、酵素、薬物送達媒体又は薬物である、[10]記載の複合体。
[12][1]〜[9]のいずれかに記載のアプタマーあるいは[10]又は[11]に記載の複合体を含む、医薬。
[13][1]〜[9]のいずれかに記載のアプタマーあるいは[10]又は[11]に記載の複合体を含む、血管新生を伴う疾患、骨・軟骨疾患又は疼痛の治療用又は予防用医薬。
[14]血管新生を伴う疾患、骨・軟骨疾患又は疼痛を治療又は予防する方法であって、有効量の[1]〜[9]のいずれかに記載のアプタマーあるいは[10]又は[11]に記載の複合体を、対象に投与することを含む方法。
[15]血管新生を伴う疾患、骨・軟骨疾患又は疼痛の治療又は予防に用いるための、[1]〜[9]のいずれかに記載のアプタマーあるいは[10]又は[11]に記載の複合体。
[16]血管新生を伴う疾患、骨・軟骨疾患又は疼痛の治療用又は予防用医薬を製造するための、[1]〜[9]のいずれかに記載のアプタマーあるいは[10]又は[11]に記載の複合体の使用。
下式(1)
N1GGAN2ACUAGGGCN3UUAAN4GUN5ACCAGUGUN6(式1)
N1及びN6は、それぞれ独立して任意の0から数個の塩基、
N2、N3、N4及びN5は、独立して任意の一個の塩基を表す、
で表わされるヌクレオチド配列(但し、ウラシルはチミンであってもよい)を含むアプタマーであって、以下(a)又は(b)
(a)該アプタマーに含まれるヌクレオチドにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位がフッ素原子であり、
(ii)各プリンヌクレオチドのリボースの2’位がヒドロキシ基である、アプタマー;あるいは
(b)該(a)のアプタマーにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位のフッ素原子が、それぞれ独立して、無置換であるか、水素原子、ヒドロキシ基及びメトキシ基からなる群より選ばれる原子又は基で置換されており、
(ii)各プリンヌクレオチドのリボースの2’位のヒドロキシ基が、それぞれ独立して、無置換であるか、水素原子、メトキシ基及びフッ素原子からなる群より選ばれる原子又は基で置換されている、アプタマー
のいずれかである、FGF2に結合するアプタマー:
を提供する。
よって、本発明のアプタマーがFGF2に結合し、FGF2とFGF受容体との結合を阻害した場合、FGF受容体を介した細胞内シグナル伝達経路の活性化に伴う作用、例えば、細胞死の抑制、細胞増殖、osteoprotegerin(OPG)産生の抑制などが阻害され得る。
N1の塩基数は、式(1)で表わされるヌクレオチド配列を含むアプタマーがFGF2に結合する限り特に限定されないが、例えば、0〜約10個、0〜9個、0〜8個、0〜7個、0〜6個、0〜5個、0〜4個、0〜3個、0〜2個などであってよく、好ましくは0〜2個であり得る。
N6の塩基数についてもN1と同様に特に限定されないが、例えば、0〜約10個、0〜9個、0〜8個、0〜7個、0〜6個、0〜5個、0〜4個、0〜3個などであってよく、好ましくは0〜10個、3〜9個、又は5〜8個である。
N1は、G、GG、AG、C又はギャップであり、
N2は、A又はUであり、
N3は、G、C又はAであり、
N4は、G、C又はUであり、
N5は、G又はUであり、
N6は、UUCN61又はAGUCN62(式中、N61及びN62は、それぞれ独立して任意の0から数個の塩基である)である。ここで、N1が「ギャップ」であるとは、式(1)中にN1が存在しないこと、すなわちN1が0個の塩基であることを意味する。
N61の塩基数は特に限定されないが、例えば、0〜約10個、0〜7個、0〜6個、0〜5個、0〜4個などであってよく、好ましくは0〜5個、1〜5個、又は2〜4個であり得る。
N62の塩基数についても特に限定されないが、例えば、0〜約10個、0〜7個、0〜5個、0〜4個、0〜3個などであってよく、好ましくは0〜5個、0〜4個、又は0〜3個であり得る。
別の好ましい実施態様において、上記式(1)中、
N1は、G、GG、AG又はギャップであり、
N2は、A又はUであり、
N3は、G又はAであり、
N4は、C又はUであり、
N5は、G又はUであり、
N6は、UUCN61又はAGUCN62(式中、N61及びN62は上記と同義である)である。
GGGAAACUAGGGCGUUAACGUGACCAGUGUUUCN61(式2)
N1GGAUACUAGGGCAUUAAUGUUACCAGUGUAGUCN62(式3)
(式中、N1、N61及びN62は前記と同義である)
で表されるヌクレオチド配列を含み得る。
配列番号1:
GGGAUACUAGGGCAUUAAUGUUACCAGUGUAGUCUCGA、
配列番号2:
GGGAAACUAGGGCGUUAACGUGACCAGUGUUUCUCGA、
配列番号3:
GGGAUACUAGGGCAUUAAUGUUACCAGUGUAGUCCC、
配列番号4:
GGAUACUAGGGCAUUAAUGUUACCAGUGUAGUCC、
配列番号5:
GGGGAUACUAGGGCAUUAAUGUUACCAGUGUAGUCCCC、
配列番号6:
AGGGAUACUAGGGCAUUAAUGUUACCAGUGUAGUCCC、
配列番号7:
GGGAAACUAGGGCGUUAACGUGACCAGUGUUUCCC、
配列番号8:
CGGAUACUAGGGCAUUAAUGUUACCAGUGUAGUCCG、
配列番号9:
CCGAUACUAGGGCAUUAAUGUUACCAGUGUAGUCGG、
配列番号10:
GGGAUACUAGGGCGUUAACGUUACCAGUGUAGUCCC、
配列番号11:
GGGAUACUAGGGCCUUAAGGUUACCAGUGUAGUCCC、
配列番号12:
GGGAUACUAGGGCAUUU AUGUUACCAGUGUAGUCCC。
好ましい一実施態様において、本発明のアプタマーは、配列番号1、3、4、5、6、8、10又は11で表わされるヌクレオチド配列を含む。
別の好ましい実施態様において、本発明のアプタマーは、配列番号2又は7で表わされるヌクレオチド配列を含む。
さらに別の好ましい実施態様において、本発明のアプタマーは、配列番号1、3、4、5又は6で表わされるヌクレオチド配列を含む。
(a)該アプタマーに含まれるヌクレオチドにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位がフッ素原子であり、
(ii)各プリンヌクレオチドのリボースの2’位がヒドロキシ基である、アプタマー;
(b)該(a)のアプタマーにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位のフッ素原子が、それぞれ独立して、無置換であるか、水素原子、ヒドロキシ基及びメトキシ基からなる群より選ばれる原子又は基で置換されており、
(ii)各プリンヌクレオチドのリボースの2’位のヒドロキシ基が、それぞれ独立して、無置換であるか、水素原子、メトキシ基及びフッ素原子からなる群より選ばれる原子又は基で置換されている、アプタマー
であってよい。ここで、上記置換、欠失、挿入又は付加されるヌクレオチド数は、置換、欠失、挿入又は付加後も依然としてFGF2に結合する限り特に限定されないが、例えば1〜約10個、好ましくは1〜6個、より好ましくは1〜5個、さらに好ましくは1〜4個、さらに好ましくは1〜3個、最も好ましくは1個又は2個であり得る。ヌクレオチドが置換、欠失、挿入又は付加される部位も、置換、欠失、挿入又は付加後も依然としてFGF2に結合する限り特に限定されないが、上記式(1)、(2)及び(3)中、1種のヌクレオチドに特定されている部位においては、1〜3か所、好ましくは1又は2か所、より好ましくは1か所においてヌクレオチドが置換、欠失、挿入又は付加される。一方、式(1)、(2)及び(3)中、複数種のヌクレオチドをとり得る部位においては、より多くのヌクレオチド(例えば、1〜約10個、好ましくは1〜6個、より好ましくは1〜5個、さらに好ましくは1〜4個)の置換、欠失、挿入又は付加も許容され得る。
よって本発明のアプタマーの長さとしては、通常約10〜約200ヌクレオチドであり得、好ましくは20〜80ヌクレオチドであり、より好ましくは25〜60ヌクレオチドであり、さらに好ましくは25〜50ヌクレオチドであり、最も好ましくは30〜45ヌクレオチドである。
ここで連結はタンデム結合にて行われ得る。また、連結に際し、リンカーを利用してもよい。リンカーとしては、ヌクレオチド鎖(例、1〜約20ヌクレオチド)、非ヌクレオチド鎖(例、−(CH2)n−リンカー、−(CH2CH2O)n−リンカー、ヘキサエチレングリコールリンカー、TEGリンカー、ペプチドを含むリンカー、−S−S−結合を含むリンカー、−CONH−結合を含むリンカー、−OPO3−結合を含むリンカー)が挙げられる。上記複数の連結物における複数とは、2以上であれば特に限定されないが、例えば2個、3個又は4個であり得る。
本発明のアプタマーにおいてはまた、全てのプリンヌクレオチドが、リボースの2’位のヒドロキシ基が上述した任意の原子又は基、例えば、水素原子、フッ素原子及び−O−Me基からなる群より選ばれる同一の原子又は基で置換されているヌクレオチドであり得る。
本発明のアプタマーにおいて、ウラシルをチミンに置換することによって、FGF2に対する結合性、FGF2とFGF受容体との結合阻害活性、アプタマーの安定性、薬物送達性、血液中での安定性等を高めることが可能である。
連結基としては、−O−、−N−又は−S−が例示され、これらの連結基を通じて隣接するヌクレオチドに結合し得る。
改変はまた、キャッピングのような3’及び5’の改変を含んでもよい。
このようなPEGとしては特に限定されず、当業者であれば市販あるいは公知のPEGを適宜選択して用いることができる(例えば、http://www.peg−drug.com/peg_product/branched.htmlを参照のこと)が、本発明のアプタマーに適用するPEGの好適例として具体的には、分子量40000の2分岐GS型PEG(SUNBRIGHT GL2−400GS 日油製)、分子量40000の2分岐TS型PEG(SUNBRIGHT GL2−400TS 日油製)、分子量40000の4分岐TS型PEG(SUNBRIGHT GL4−400TS 日油製)、分子量80000の2分岐TS型PEG(SUNBRIGHT GL2−800TS 日油製)、又は分子量80000の4分岐TS型PEG(SUNBRIGHT GL4−800TS 日油製)などが挙げられる。
SELEXで得られるアプタマーはそのプライマー設計に依存して、その後の最小化作業のしやすさが変わる。うまくプライマーを設計しないと、SELEXによって活性のあるアプタマーが選別できたとしても、その後の開発が不可能となる。
(i)各ピリミジンヌクレオチドのリボースの2’位がフッ素原子であり、
(ii)各プリンヌクレオチドのリボースの2’位がヒドロキシ基である、アプタマー;(b’)配列番号1〜7のいずれか(あるいは、配列番号2もしくは7、又は配列番号1及び3〜6のいずれか)で表わされるヌクレオチド配列(但し、ウラシルはチミンであってもよい)において、1〜5個(あるいは、1〜4個、又は1〜3個)のヌクレオチドが置換、欠失、挿入又は付加されたヌクレオチド配列を含むアプタマーであって、該アプタマーに含まれるヌクレオチドにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位フッ素原子であり、
(ii)各プリンヌクレオチドのリボースの2’位がヒドロキシ基である、アプタマー;又は
(c’)該(a’)又は(b’)のアプタマーにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位のフッ素原子が、それぞれ独立して、無置換であるか、水素原子、ヒドロキシ基及びメトキシ基からなる群より選ばれる原子又は基で置換されており、
(ii)各プリンヌクレオチドのリボースの2’位のヒドロキシ基が、それぞれ独立して、無置換であるか、水素原子、メトキシ基及びフッ素原子からなる群より選ばれる原子又は基で置換されている、アプタマー、
であり、さらに好ましくは、上記アプタマーのうちヌクレオチド長が30〜45ヌクレオチドであるアプタマーである。
油としては、例えばトウモロコシ油、オリーブ油、綿実油、ヒマワリ油等が挙げられる。また、軟膏剤の場合、適当な医薬上許容される基剤(黄色ワセリン、白色ワセリン、パラフィン、プラスチベース、シリコーン、白色軟膏、ミツロウ、豚油、植物油、親水軟膏、親水ワセリン、精製ラノリン、加水ラノリン、吸水軟膏、親水プラスチベース、マクロゴール軟膏等)を用い、有効成分と混合し製剤化し使用する。
本発明のアプタマーは1本鎖の核酸であるため、相補配列を含むヌクレオチドの投与による解毒も可能であり、投与後の動態制御が困難な中和抗体より安全性の高い医薬品となる可能性が高い。これは、抗体医薬治療などで起こりうる、体内における抗体の長い滞留時間に起因する感染症の問題を鑑みても極めて有利な点と言える。特に本発明の医薬を上記疾患の予防又は治療用医薬として用いる場合、疾患の重篤性と副作用のリスクとを考えると、体内動態を制御しやすいアプタマーを利用する方がより高い安全性を有する医薬を得られることは明白である。
本発明の精製及び濃縮方法はさらに、FGF2の吸着後、洗浄液を用いて当該固相担体を洗浄することを含み得る。洗浄液としては、例えば、尿素、キレート剤(例、EDTA)、Tris、酸、アルカリ、Transfer RNA、DNA、Tween(ツイーン)20などの表面活性剤、NaClなどの塩を含むものなどが挙げられる。本発明の精製及び濃縮方法はさらに、当該固相担体を加熱処理することを含み得る。かかる工程により、当該固相担体の再生、滅菌が可能である。
従来のSELEX法では約30mer〜40merのランダム配列の両末端に20mer前後のプライマーを付けたライブラリーが使用された。その場合、取得されるアプタマーの全長は約80〜100merであり、その後短鎖化の作業が必要であった。しかし、短鎖化は必ずしも簡単ではなく、活性が大きく低下してしまうことがしばしばであった。そこで、NOXXON社によって開発されたTailored−SELEX法を参考にして(Vater et al.Nucleic Acids Res. 31, 2003,el30; Jarosch et al. Nucleic Acids Res. 34, 2006, e86)、プライマー配列が入らない30mer程度の長さのRNAプールを用いたSELEXを実施した。
使用したDNA鋳型とプライマー配列は以下の通りである。
DNA鋳型:
5’−TCGAG−30N−TCCCTATAGTGAGTCGTATTAGCAGCTCCACAGGCTT−3’(配列番号13)
Forward ligate:
5’−UAAUACGACUCACUAUA−3’(配列番号14)
Forward primer:
5’−AAGCCTGTGGAGCTGCTAATACGACTCACTATAGGGA−3’(配列番号15)
Forward bridge:
5’−TCCCTATAGTGAGTCGTATTA−NH2−3’(配列番号16)
Reverse bridge:
5’−TCTTGTTCAGCTTAGTTCTCTCGAG−3’(配列番号17)
Reverse ligate:
5’−p−GAGAACTAAGCTGAACAAGA−NH2−3’(配列番号18)
アプタマーID1:
GGGAU(F)AC(F)U(F)AGGGC(F)AU(F)U(F)AAU(F)GU(F)U(F)AC(F)C(F)AGU(F)GU(F)AGU(F)C(F)U(F)C(F)GA
アプタマーID2:
GGGAAAC(F)U(F)AGGGC(F)GU(F)U(F)AAC(F)GU(F)GAC(F)C(F)AGU(F)GU(F)U(F)U(F)C(F)U(F)C(F)GA
配列番号1及び2で表わされるアプタマーの短鎖化を行った。MFOLDプログラム(Zuker,Nucleic Acids Res.31,3406−3415,2003)を用いてRNAの2次構造を予測し、その構造を参考に短鎖化した。短鎖化体は、目的の配列のDNAを化学合成により作製し、DuraScribe T7 Transcription Kitを用いて転写することで得られた。以下に、実際に作製した短鎖化体のヌクレオチド配列(配列番号3及び7)をリボースの2’位の修飾と共にアプタマーID3及び7として示す。
GGGAU(F)AC(F)U(F)AGGGC(F)AU(F)U(F)AAU(F)GU(F)U(F)AC(F)C(F)AGU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID7:配列番号2で表わされるアプタマー改変体で35ヌクレオチドの長さのアプタマー
GGGAAAC(F)U(F)AGGGC(F)GU(F)U(F)AAC(F)GU(F)GAC(F)C(F)AGU(F)GU(F)U(F)U(F)C(F)C(F)C(F)
アプタマーID3で表わされるFGF2アプタマーが同じFGFファミリーのFGF1、又はいくつかの成長因子EGF、β―NGF、VEGFに結合するかどうか表面プラズモン共鳴法で調べた。測定にはBIAcore社製のBIAcore2000を用いた。センサーチップにはストレプトアビジンが固定化されているSAチップを用いた。これに、5末端にビオチンが付加したアプタマーID3で表わされるアプタマーを約500RU程度結合させた。ビオチン付きアプタマーは化学合成によって作製した。リガンドとなるタンパク質はR&D社製のFGF1、EGF、β―NGF、VEGFを用いた。ランニングバッファーは実施例1で使用した溶液Aに最終濃度0.3Mになるように塩化ナトリウムを添加したものを用いた。その結果、アプタマーID3で表わされるアプタマーはFGF2とは結合するが、他のタンパク質とは結合しないことがわかった。そのセンサーグラムを図3に示す。
以上より、アプタマーID3で表わされるアプタマーはFGF2に特異的に結合することが判明した。
FGF2に対する結合性、安定性、薬物送達性などを高めるため、配列番号3で表わされるアプタマーを基にして、アプタマーID3(1)−3(40)、アプタマーID4及び4(1)―4(4)、アプタマーID5並びにアプタマーID6で表わされる核酸を化学合成した。ここで、アプタマーID4で表わされるアプタマーはアプタマーID3(19)で表わされるアプタマーの5’末端のG(M)及び3’末端のC(M)をそれぞれ一つ削ったものであった。アプタマーID5で表わされるアプタマーはアプタマーID3(19)で表わされるアプタマーの5’末端にG(M)及び3’末端にC(M)をそれぞれ一つ追加したものであった。また、アプタマーID6で表わされるアプタマーはアプタマーID3(19)で表わされるアプタマーの5’末端にA(M)だけを追加したものであった。これらの核酸は化学合成により作製した。作製したアプタマーがFGF2とFGF受容体の結合を阻害するかどうか実施例1と同様に調べた。ここでは、アプタマー、FGF2、ヘパリンの濃度をすべて0.1μMとした。実験の結果、測定した全てのアプタマーがFGF2とFGFR1α(IIIc)受容体の結合を強く阻害することがわかった。表3にその結果を示す。
GGGAU(F)AC(F)U(F)AGGGC(F)A(M)U(F)U(F)A(M)A(M)U(F)G(M)U(F)U(F)AC(F)C(F)AGU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(2)
G(M)G(M)G(M)A(M)U(F)AC(F)U(F)AGGGC(F)AU(F)U(F)AAU(F)GU(F)U(F)AC(F)C(F)AGU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(3)
GGGAU(F)AC(F)U(F)AGG(M)GC(F)AU(F)U(F)AAU(F)GU(F)U(F)AC(F)C(F)AGU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(4)
GGGAU(F)AC(F)U(F)AG(M)GGC(F)AU(F)U(F)AAU(F)GU(F)U(F)AC(F)C(F)AGU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(5)
GGGAU(F)AC(F)U(F)A(M)GGGC(F)AU(F)U(F)AAU(F)GU(F)U(F)AC(F)C(F)AGU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(6)
GGGAU(F)AC(F)U(F)AGGGC(F)AU(F)U(F)AAU(F)GU(F)U(F)A(M)C(F)C(F)AGU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(7)
GGGAU(F)AC(F)U(F)AGGGC(F)AU(F)U(F)AAU(F)GU(F)U(F)AC(F)C(F)A(M)GU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(8)
G(M)G(M)G(M)A(M)U(F)AC(F)U(F)A(M)G(M)G(M)GC(F)A(M)U(F)U(F)A(M)A(M)U(F)G(M)U(F)U(F)A(M)C(F)C(F)A(M)GU(F)GU(F)AGU(F)C(F)C(F))C(F)−idT
アプタマーID3(9)
GGGAU(F)A(M)C(F)U(F)AGGGC(F)AU(F)U(F)AAU(F)GU(F)U(F)AC(F)C(F)AGU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(10)
GGGAU(F)AC(F)U(F)AGGGC(F)AU(F)U(F)AAU(F)GU(F)U(F)AC(F)C(F)AGU(F)GU(F)AG(M)U(F)C(F)C(F)C(F)
アプタマーID3(11)
GGGAU(F)AC(F)U(F)AGGGC(F)AU(F)U(F)AAU(F)GU(F)U(F)AC(F)C(F)AGU(F)GU(F)A(M)GU(F)C(F)C(F)C(F)
アプタマーID3(12)
G(M)G(M)G(M)A(M)U(F)AC(F)U(F)A(M)G(M)G(M)GC(F)A(M)U(F)U(F)A(M)A(M)U(F)G(M)U(F)U(F)A(M)C(F)C(F)A(M)GU(F)GU(F)AGU(M)C(M)C(M)C(M)−idT
アプタマーID3(13)
G(M)G(M)G(M)A(M)U(F)AC(F)U(F)A(M)G(M)G(M)GC(F)A(M)U(M)U(M)A(M)A(M)U(M)G(M)U(F)U(F)A(M)C(F)C(F)A(M)GU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(14)
G(M)G(M)G(M)A(M)U(F)AC(F)U(F)A(M)G(M)G(M)GC(F)A(M)U(F)U(F)A(M)A(M)U(F)G(M)U(F)U(M)A(M)C(F)C(F)A(M)GU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(15)
G(M)G(M)G(M)A(M)U(F)AC(F)U(F)A(M)G(M)G(M)GC(F)A(M)U(F)U(F)A(M)A(M)U(F)G(M)U(F)U(F)A(M)C(M)C(M)A(M)GU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(16)
G(M)G(M)G(M)A(M)U(F)AC(M)U(F)A(M)G(M)G(M)GC(F)A(M)U(F)U(F)A(M)A(M)U(F)G(M)U(F)U(F)A(M)C(F)C(F)A(M)GU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(17)
G(M)G(M)G(M)A(M)U(M)AC(F)U(F)A(M)G(M)G(M)GC(F)A(M)U(F)U(F)A(M)A(M)U(F)G(M)U(F)U(F)A(M)C(F)C(F)A(M)GU(F)GU(F)AGU(F)C(F)C(F)C(F)
アプタマーID3(18)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(19)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)−idT
アプタマーID3(20)
idT−G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(21)
GL2−400TS−C6−G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)−idT
アプタマーID3(22)
idT−G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)−C6−GL2−400TS
アプタマーID3(23)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)gC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(24)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)gU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(25)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)G(F)C(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(26)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)G(F)U(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(27)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)G(F)U(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(28)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)sGC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(29)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GsC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(30)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)sGU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(31)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GsU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(32)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)sGU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(33)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GsU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID3(34)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)G(F)C(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)G(F)U(F)G(F)U(F)A(M)G(M)U(M)C(M)C(M)C(M)−idT
アプタマーID3(35)
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)G(F)C(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)G(F)U(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)−idT
アプタマーID3(36)
GL4−800TS−C6−G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)−idT
アプタマーID3(37)
Y−NHS−40K−ssH−G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)−idT
アプタマーID3(38)
ME−100TS−C6−G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)−idT
アプタマーID3(39)
PTE−100CS−C6−G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)−idT
アプタマーID3(40)
GL2−400TS−ssH−G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)−idT
アプタマーID4:アプタマーID3(19)で表わされるアプタマーの改変体で34ヌクレオチドの長さのアプタマー
G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)−idT
アプタマーID4(1)
G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)G(F)C(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)−idT
アプタマーID4(2)
G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)G(F)C(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)G(F)U(F)GU(F)A(M)G(M)U(M)C(M)C(M)−idT
アプタマーID4(3)
G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)G(F)C(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)sGU(F)A(M)G(M)U(M)C(M)C(M)−idT
アプタマーID4(4)
G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)G(F)C(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)G(F)U(F)GsU(F)A(M)G(M)U(M)C(M)C(M)−idT
アプタマーID5:アプタマーID3(19)で表わされるアプタマーの改変体で38ヌクレオチドの長さのアプタマー
G(M)G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)C(M)−idT
アプタマーID6:アプタマーID3(19)で表わされるアプタマーの改変体で37ヌクレオチドの長さのアプタマー
A(M)G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)−idT
ヒト臍帯静脈血管内皮細胞(HUVEC)を96ウェル平底プレートに1ウェル当たり5x103個播種し、2%ウシ胎児血清と成長因子を含んだ内皮細胞専用培地EGM−2 BulletKit(CC−3162 Lonza社製)で一晩培養した。その後、培地を捨て、PBSバッファーで2回洗浄後、2%ウシ胎児血清を含んだ内皮細胞専用培地に溶解したアプタマーID3(21)で表わされるアプタマー(5、2.5、1、0.5nM)とFGF2(最終濃度0.5nM)の混合液を添加した。72時間後にCell Counting Kit−8を用いて生細胞数を調べた。吸光度測定にはマイクロプレートリーダー(450nm)を使用した。1サンプルはn=3で測定した。ポジティブコントロールとして抗FGF2抗体Anti−FGF, basic(Ab−3) Mouse mAb(3H3)(Calbiochem社製)を用いた。FGF2のみの添加で細胞を3日間培養して得られた1ウェルあたりのOD値を阻害活性0%、FGF2無添加で3日間培養して得られた1ウェルあたりのOD値を阻害活性100%として、FGF2とアプタマーの混合液を添加した場合に得られた1ウェルあたりのOD値から、アプタマーの阻害活性を求めた。その結果、アプタマーID3(21)で表わされるアプタマーがFGF2に対して高い阻害活性を有していることが示された。IC50値は約1.0nMであった。結果を表4に示す。
実施例5と同様な方法で、アプタマーID8から12で表されるアプタマーの阻害活性を測定した。その結果を表6に示す。
アプタマーID8〜12のヌクレオチド配列はそれぞれ配列番号8〜12で表される。
NH2−C(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)G(M)−idT
アプタマーID9
NH2−C(M)C(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)A(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)G(M)G(M)−idT
アプタマーID10
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)G(M)U(M)U(F)A(M)A(M)C(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID11
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)C(M)U(M)U(F)A(M)A(M)G(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
アプタマーID12
G(M)G(M)G(M)A(M)U(M)A(M)C(M)U(F)A(M)G(M)G(M)GC(M)A(M)U(M)U(F)U(M)A(M)U(M)G(M)U(F)U(M)A(M)C(M)C(M)A(M)GU(F)GU(F)A(M)G(M)U(M)C(M)C(M)C(M)
ヒトFGF−2(R&D社製)を含む0.76%(最終濃度)のクエン酸ナトリウム含有マトリゲル(BDマトリゲルTM)を8週令のC57BL/6Jマウス(♀)の皮下に麻酔下で注入した。7日後にマトリゲルを摘出し、血管新生の度合いをマトリゲル中のヘモグロビン量で評価した。ヘモグロビン量はDrabkin Reagent Kitを用いてシアンメトヘモグロビン法で定量した。アプタマーは1mM塩化マグネシウムを含んだリン酸緩衝液に溶解し、マトリゲル皮下投与直後から、一日1回腹腔内に投与した。投与群を表7に、結果を表8に示す。アプタマー1mg/kg群で顕著な血管新生阻害が観察された。以上より、本発明のアプタマーがモデル動物においても強い血管新生阻害活性を示すことが確認された。
Claims (15)
- 下式(1)で表わされるヌクレオチド配列(但し、ウラシルはチミンであってもよい)を含むアプタマーであって、以下(a)又は(b)のいずれかである、FGF2に結合するアプタマー:
N1GGAN2ACUAGGGCN3UUAAN4GUN5ACCAGUGUN6(式1)
N1及びN6は、それぞれ独立して任意の0から数個の塩基、
N2、N3、N4及びN5は、独立して任意の一個の塩基を表す、
(a)該アプタマーに含まれるヌクレオチドにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位がフッ素原子であり、
(ii)各プリンヌクレオチドのリボースの2’位がヒドロキシ基である、アプタマー;
(b)該(a)のアプタマーにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位のフッ素原子が、それぞれ独立して、無置換であるか、水素原子、ヒドロキシ基及びメトキシ基からなる群より選ばれる原子又は基で置換されており、
(ii)各プリンヌクレオチドのリボースの2’位のヒドロキシ基が、それぞれ独立して、無置換であるか、水素原子、メトキシ基及びフッ素原子からなる群より選ばれる原子又は基で置換されている、アプタマー。 - N1は、G、GG、AG、C又はギャップ、
N2は、A又はU、
N3は、G、C又はA、
N4は、G、C又はU、
N5は、G又はU、
N6は、UUCN61又はAGUCN62
N61及びN62は、それぞれ独立して任意の0から数個の塩基である、
請求項1記載のアプタマー。 - 下式(2)又は(3)で表わされるヌクレオチド配列を含む、請求項1又は2記載のアプタマー:
GGGAAACUAGGGCGUUAACGUGACCAGUGUUUCN61(式2)
N1GGAUACUAGGGCAUUAAUGUUACCAGUGUAGUCN62(式3)。 - 配列番号2又は7で表わされるヌクレオチド配列を含む、請求項1〜3のいずれか一項に記載のアプタマー。
- 配列番号1、3、4、5、6、8、10又は11で表わされるヌクレオチド配列を含む、請求項1〜3のいずれか一項に記載のアプタマー。
- 請求項1〜5のいずれか一項に記載のアプタマーにおいて、1又は数個のヌクレオチドが置換、欠失、挿入又は付加されたヌクレオチド配列を含むアプタマーであって、
(a)該アプタマーに含まれるヌクレオチドにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位がフッ素原子であり、
(ii)各プリンヌクレオチドのリボースの2’位がヒドロキシ基である、アプタマー;
(b)該(a)のアプタマーにおいて、
(i)各ピリミジンヌクレオチドのリボースの2’位のフッ素原子が、それぞれ独立して、無置換であるか、水素原子、ヒドロキシ基及びメトキシ基からなる群より選ばれる原子又は基で置換されており、
(ii)各プリンヌクレオチドのリボースの2’位のヒドロキシ基が、それぞれ独立して、無置換であるか、水素原子、メトキシ基及びフッ素原子からなる群より選ばれる原子又は基で置換されている、アプタマー。 - ヌクレオチドの長さが45ヌクレオチド以下である、請求項1〜6のいずれか一項に記載のアプタマー。
- FGF2とFGF受容体との結合を阻害する、請求項1〜7のいずれか一項に記載のアプタマー。
- 少なくとも1つのヌクレオチドが修飾されている、請求項1〜8のいずれか一項に記載のアプタマー。
- 請求項1〜9のいずれか一項に記載のアプタマー及び機能性物質を含む複合体。
- 機能性物質が、親和性物質、標識用物質、酵素、薬物送達媒体又は薬物である、請求項10記載の複合体。
- 請求項1〜9のいずれか一項に記載のアプタマーあるいは請求項10又は11に記載の複合体を含む、医薬。
- 請求項1〜9のいずれか一項に記載のアプタマーあるいは請求項10又は11に記載の複合体を含む、血管新生を伴う疾患、骨・軟骨疾患又は疼痛の治療用又は予防用医薬。
- 血管新生を伴う疾患、骨・軟骨疾患又は疼痛の治療又は予防に用いるための、請求項1〜9のいずれか一項に記載のアプタマーあるいは請求項10又は11に記載の複合体。
- 血管新生を伴う疾患、骨・軟骨疾患又は疼痛の治療用又は予防用医薬を製造するための、請求項1〜9のいずれか一項に記載のアプタマーあるいは請求項10又は11に記載の複合体の使用。
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