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Add support for cmake build system. #11

Merged
merged 17 commits into from
Dec 5, 2019
Merged

Add support for cmake build system. #11

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2464455
Add CMakeLists.txt
DusanJovic-NOAA Oct 15, 2019
575c1d0
Merge branch 'develop' into cmake_rt
DusanJovic-NOAA Nov 4, 2019
186cf76
update after merge with develop (move ccpp under FV3)
DusanJovic-NOAA Nov 4, 2019
cf8e622
update ccpp prebuild step for out-of-source build. run all compiles c…
DusanJovic-NOAA Nov 5, 2019
0e7ff41
add INLINE_POST cmake option
DusanJovic-NOAA Nov 7, 2019
ea43231
update FV3 submodule
DusanJovic-NOAA Nov 8, 2019
b8b2472
update cmake an regtest on jet
DusanJovic-NOAA Nov 8, 2019
ed950b6
Update .gitmodule to point to DusanJovic-NOAA/fv3atm
DusanJovic-NOAA Nov 22, 2019
82412ab
remove cmake/configure_theia.*. set AVX2 to OFF in cmake/configure_li…
DusanJovic-NOAA Nov 23, 2019
575a188
Update CMakeLists.txt. Enable WW3 on hera.
DusanJovic-NOAA Nov 24, 2019
7ccd3ea
Add build.sh
DusanJovic-NOAA Nov 24, 2019
39ec12f
Enable inline post on Hera
DusanJovic-NOAA Nov 24, 2019
b174df7
Update build.sh to use BUILD_JOBS environment variable if set. Update…
DusanJovic-NOAA Nov 25, 2019
d018c21
Merge remote-tracking branch 'origin/cmake_rt' into ufs_public_release
DusanJovic-NOAA Nov 25, 2019
e7dcda0
Remove comments about serialized ccpp builds. All build jobs are now …
DusanJovic-NOAA Nov 27, 2019
d62d01a
Updates for compiling on macOS with clang/gfortran or gcc/gfortran (#1)
climbfuji Dec 3, 2019
d909be3
Update .gitmodules and fv3atm submodule pointer
DusanJovic-NOAA Dec 5, 2019
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add INLINE_POST cmake option
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@DusanJovic-NOAA
DusanJovic-NOAA committed Nov 7, 2019
commit 0e7ff414024439b1d17f1396dbbdc0676e643905
2 changes: 1 addition & 1 deletion FV3
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Submodule FV3 updated 6 files
+3 −1 ccpp/driver/CMakeLists.txt
+3 −1 gfsphysics/CMakeLists.txt
+7 −2 io/CMakeLists.txt
+3 −1 ipd/CMakeLists.txt
+3 −1 namphysics/CMakeLists.txt
+3 −1 stochastic_physics/CMakeLists.txt
28 changes: 16 additions & 12 deletions cmake/GNU.cmake
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Original file line number Diff line number Diff line change
Expand Up @@ -2,54 +2,58 @@
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -fcray-pointer -ffree-line-length-none -fno-range-check -fbacktrace")

if(DEBUG)
message("DEBUG is ENABLED")
message("DEBUG is ENABLED")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -g -O0 -fno-unsafe-math-optimizations -frounding-math -fsignaling-nans -ffpe-trap=invalid,zero,overflow -fbounds-check -fbacktrace -fno-range-check")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -O0 -g")
else()
message("DEBUG is disabled (optimized build)")
message("DEBUG is disabled (optimized build)")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -O2 -fno-range-check")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -O2")
endif()


if(REPRO)
message("REPRO is ENABLED")
message("REPRO is ENABLED")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -O2 -g -fbacktrace -fno-range-check")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -O2")
else()
message("REPRO is disabled")
message("REPRO is disabled")
endif()

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I would also add a mechanism to either abort if both REPRO and DEBUG are requested, or make one of the two superior (I suggest DEBUG). In the latter case, issue a warning that both REPRO and DEBUG where requested, and that DEBUG will be used (and REPRO disabled).


if(32BIT)
message("32BIT is ENABLED")
message("32BIT is ENABLED")
add_definitions(-DOVERLOAD_R4)
add_definitions(-DOVERLOAD_R8)
else()
message("32BIT is disabled")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -fdefault-real-8 -fdefault-double-8")
message("32BIT is disabled")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -fdefault-real-8")
endif()


if(OPENMP)
message("OPENMP is ENABLED")
message("OPENMP is ENABLED")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -fopenmp")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -fopenmp")
set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -fopenmp")
add_definitions(-DOPENMP)
else()
message("OPENMP is disabled")
message("OPENMP is disabled")
endif()


if(AVX2)
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message("AVX2 is ENABLED")
message("AVX2 is ENABLED")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS}")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS}")
else()
message("AVX2 is disabled")
message("AVX2 is disabled")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS}")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS}")
endif()

set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -D__IFC")
if(INLINE_POST)
message("INLINE_POST is ENABLED")
else()
message("INLINE_POST is disabled")
endif()
25 changes: 15 additions & 10 deletions cmake/Intel.cmake
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Original file line number Diff line number Diff line change
Expand Up @@ -51,37 +51,42 @@ if(OPENMP)
endif()



set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -D__IFC -sox -fp-model source")

# print build options

if(DEBUG)
message("DEBUG is ENABLED")
message("DEBUG is ENABLED")
else()
message("DEBUG is disabled")
message("DEBUG is disabled")
endif()

if(REPRO)
message("REPRO is ENABLED")
message("REPRO is ENABLED")
else()
message("REPRO is disabled")
message("REPRO is disabled")
endif()

if(32BIT)
message("32BIT is ENABLED")
message("32BIT is ENABLED")
else()
message("32BIT is disabled")
message("32BIT is disabled")
endif()

if(OPENMP)
message("OPENMP is ENABLED")
message("OPENMP is ENABLED")
else()
message("OPENMP is disabled")
message("OPENMP is disabled")
endif()


if(AVX2)
message("AVX2 is ENABLED")
message("AVX2 is ENABLED")
endif()


if(INLINE_POST)
message("INLINE_POST is ENABLED")
else()
message("INLINE_POST is disabled")
endif()
27 changes: 16 additions & 11 deletions cmake/PGI.cmake
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Original file line number Diff line number Diff line change
Expand Up @@ -2,56 +2,61 @@
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -Mpreprocess")

if(DEBUG)
message("DEBUG is ENABLED")
message("DEBUG is ENABLED")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -g -O0 -Ktrap=fp -Mbounds -traceback")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -O0 -g -traceback")
else()
message("DEBUG is disabled (optimized build)")
message("DEBUG is disabled (optimized build)")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -O2")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -O2")
set(FAST "-fast-transcendentals")
endif()


if(REPRO)
message("REPRO is ENABLED")
message("REPRO is ENABLED")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -O1 -g -traceback")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -O2")
else()
message("REPRO is disabled")
message("REPRO is disabled")
endif()


if(32BIT)
message("32BIT is ENABLED")
message("32BIT is ENABLED")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -i4 -r4")
add_definitions(-DOVERLOAD_R4)
add_definitions(-DOVERLOAD_R8)
else()
message("32BIT is disabled")
message("32BIT is disabled")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -i4 -r8 -Mfprelaxed=div -Mfprelaxed=sqrt")
endif()


if(OPENMP)
message("OPENMP is ENABLED")
message("OPENMP is ENABLED")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -mp")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -mp")
set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -mp")
add_definitions(-DOPENMP)
else()
message("OPENMP is disabled")
message("OPENMP is disabled")
endif()


if(AVX2)
message("AVX2 is ENABLED")
message("AVX2 is ENABLED")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -tp=haswell")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -tp=haswell")
else()
message("AVX2 is disabled")
message("AVX2 is disabled")
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -tp=x64")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -tp=x64")
endif()

set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -D__IFC")

if(INLINE_POST)
message("INLINE_POST is ENABLED")
else()
message("INLINE_POST is disabled")
endif()
34 changes: 34 additions & 0 deletions cmake/configure_linux.gnu.cmake
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Original file line number Diff line number Diff line change
@@ -0,0 +1,34 @@
message("")
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message("Setting configuration for $ENV{CMAKE_Platform}")
message("")

get_filename_component (C_COMPILER_NAME ${CMAKE_C_COMPILER} NAME)
get_filename_component (CXX_COMPILER_NAME ${CMAKE_CXX_COMPILER} NAME)
get_filename_component (Fortran_COMPILER_NAME ${CMAKE_Fortran_COMPILER} NAME)
message("C compiler: ${CMAKE_C_COMPILER_ID} ${CMAKE_C_COMPILER_VERSION} (${C_COMPILER_NAME})")
message("CXX compiler: ${CMAKE_CXX_COMPILER_ID} ${CMAKE_CXX_COMPILER_VERSION} (${CXX_COMPILER_NAME})")
message("Fortran compiler: ${CMAKE_Fortran_COMPILER_ID} ${CMAKE_Fortran_COMPILER_VERSION} (${Fortran_COMPILER_NAME})")
message("")

option(DEBUG "Enable DEBUG mode" OFF)
option(REPRO "Enable REPRO mode" OFF)
option(VERBOSE "Enable VERBOSE mode" OFF)
option(32BIT "Enable 32BIT (single precision arithmetic in dycore)" OFF)
option(OPENMP "Enable OpenMP threading" ON)
option(AVX2 "Enable AVX2 instruction set" ON)

option(INLINE_POST "Enable inline post" OFF)

include( cmake/${CMAKE_Fortran_COMPILER_ID}.cmake )

set(NEMSIO_INC $ENV{NEMSIO_INC})
set(NCEP_LIBS $ENV{NEMSIO_LIB} $ENV{BACIO_LIB4} $ENV{SP_LIBd} $ENV{W3EMC_LIBd} $ENV{W3NCO_LIBd})

set(ESMF_MOD ${ESMF_F90COMPILEPATHS})
set(ESMF_LIBS "${ESMF_F90ESMFLINKRPATHS} ${ESMF_F90ESMFLINKPATHS} ${ESMF_F90ESMFLINKLIBS}")

set(NETCDF_INC_DIR $ENV{NETCDF}/include)
set(NETCDF_LIBDIR $ENV{NETCDF}/lib)
set(NETCDF_LIBS -L$ENV{NETCDF}/lib -lnetcdff -lnetcdf)

message("")
35 changes: 35 additions & 0 deletions cmake/configure_linux.intel.cmake
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Original file line number Diff line number Diff line change
@@ -0,0 +1,35 @@
message("")
message("Setting configuration for $ENV{CMAKE_Platform}")
message("")

get_filename_component (C_COMPILER_NAME ${CMAKE_C_COMPILER} NAME)
get_filename_component (CXX_COMPILER_NAME ${CMAKE_CXX_COMPILER} NAME)
get_filename_component (Fortran_COMPILER_NAME ${CMAKE_Fortran_COMPILER} NAME)
message("C compiler: ${CMAKE_C_COMPILER_ID} ${CMAKE_C_COMPILER_VERSION} (${C_COMPILER_NAME})")
message("CXX compiler: ${CMAKE_CXX_COMPILER_ID} ${CMAKE_CXX_COMPILER_VERSION} (${CXX_COMPILER_NAME})")
message("Fortran compiler: ${CMAKE_Fortran_COMPILER_ID} ${CMAKE_Fortran_COMPILER_VERSION} (${Fortran_COMPILER_NAME})")
message("")

option(DEBUG "Enable DEBUG mode" OFF)
option(REPRO "Enable REPRO mode" OFF)
option(VERBOSE "Enable VERBOSE mode" OFF)
option(32BIT "Enable 32BIT (single precision arithmetic in dycore)" OFF)
option(OPENMP "Enable OpenMP threading" ON)
option(AVX2 "Enable AVX2 instruction set" OFF)

option(INLINE_POST "Enable inline post" OFF)

include( cmake/${CMAKE_Fortran_COMPILER_ID}.cmake )

set(NEMSIO_INC $ENV{NEMSIO_INC})
set(POST_INC $ENV{POST_INC})
set(NCEP_LIBS $ENV{POST_LIB} $ENV{NEMSIO_LIB} $ENV{G2_LIB4} $ENV{G2TMPL_LIB} $ENV{BACIO_LIB4} $ENV{SP_LIBd} $ENV{W3EMC_LIBd} $ENV{W3NCO_LIBd} $ENV{CRTM_LIB} $ENV{PNG_LIB} $ENV{JASPER_LIB} $ENV{Z_LIB})

set(ESMF_MOD ${ESMF_F90COMPILEPATHS})
set(ESMF_LIBS "${ESMF_F90ESMFLINKRPATHS} ${ESMF_F90ESMFLINKPATHS} ${ESMF_F90ESMFLINKLIBS}")

set(NETCDF_INC_DIR $ENV{NETCDF}/include)
set(NETCDF_LIBDIR $ENV{NETCDF}/lib)
set(NETCDF_LIBS -L$ENV{NETCDF}/lib -lnetcdff -lnetcdf)

message("")