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Pull requests: ucscXena/xena-GDC-ETL

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Pull requests list

Add DLBCL, ORGANOID-PANCREATIC & MMRF-COMMPASS cohorts
#97 by ayan-b was merged Aug 22, 2019 Loading…
4
@ayan-b
Update docs
#96 by ayan-b was merged Aug 19, 2019 Loading…
5 tasks done
1
@ayan-b
1
Add GISTIC and CNV Pan-can
#93 by ayan-b was merged Aug 19, 2019 Loading…
@ayan-b
Update illuminaMethyl probemaps
#92 by ayan-b was merged Jul 31, 2019 Loading…
1
Add GDCAPIPhenoset
#91 by ayan-b was merged Aug 5, 2019 Loading…
1 task done
1
@ayan-b
50
Reorder merge
#90 by ayan-b was merged Jul 29, 2019 Loading…
@ayan-b
7
Rename GDC_Description --> description
#89 by ayan-b was merged Jul 18, 2019 Loading…
2
@ayan-b
Drop samples having no genomic data
#85 by ayan-b was merged Jul 16, 2019 Loading…
1
@ayan-b
2
Remove columns having list datatype
#82 by ayan-b was merged Jul 12, 2019 Loading…
1
@ayan-b
5
Change GISTIC name and add note to metadata json
#77 by ayan-b was merged Jul 8, 2019 Loading…
1
@ayan-b
Add XLSX file format
#70 by ayan-b was merged Jul 8, 2019 Loading…
@ayan-b
16
template.gistic.meta.json: Add min and max ready for merge review
#65 by ayan-b was merged Jul 3, 2019 Loading…
1
@ayan-b
5
Add GDC_Description to metadata json file
#51 by ayan-b was merged Jun 24, 2019 Loading…
3
Add GISTIC datatype
#50 by ayan-b was merged Jul 1, 2019 Loading…
@ayan-b
61
Add a CLI option to delete raw data upon generation of xena_matrix
#47 by ayan-b was merged Jun 19, 2019 Loading…
20
Log a unfinished.json file
#43 by ayan-b was merged Jun 13, 2019 Loading…
@ayan-b
6
Add retry functionality in download
#41 by ayan-b was merged Jun 13, 2019 Loading…
@ayan-b
11
test_gdc.py: Fix test_get_samples_clinical test
#40 by ayan-b was merged Jun 7, 2019 Loading…
5
Add test for gdc_check_new
#24 by ayan-b was merged May 13, 2019 Loading…
10
Code cleanup Rebase and merge
#17 by ayan-b was merged Apr 8, 2019 Loading…
37
Add travis CI and preliminary tests
#12 by ayan-b was merged Mar 19, 2019 Loading…
15
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