Find causal cell-types underlying complex trait genetics
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Updated
May 17, 2024 - R
Find causal cell-types underlying complex trait genetics
Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)
An Efficient Swiss Army Knife for Population Genomic Analyses in R
🔖 Get SNP proxies from the 1000 Genomes Project.
An interactive web portal for exploring SNPs among 1,007 rapeseed germplasm accessions
A QC pipeline for SVs calls based on coverage and SNP calls
An R package for detecting copy number variants from SNPs data
🍸R version of SConES, a systems-biology approach to GWAS.
This repository contains a workflow to perform genome-environment association analysis with redundancy analysis.
Code for analyzing 16S rRNA and metagenomic data, SNP data, and immune data from pigs.
R scripts & functions for SNP data analysis of genotyping data from Affymetrix Axiom arrays
DNA Imputation tool for Generis.
Scripts and data associated with "Genome-wide signatures of synergistic epistasis during parallel adaptation in a Baltic Sea copepod"
Principal Component Analysis, PCA, Gaussian Markov Random Fields, Graphical model,
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