A battery of methylation tools for PacBio HiFi reads
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Updated
Jul 19, 2024
A battery of methylation tools for PacBio HiFi reads
Comprehensive tool for visualizing genome-wide cytosine data.
tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
Computational biology/bioinformatics workflows, codes, and concept notes on NGS data
A Transformer-based model for read-level DNA methylation pattern identification and tumour deconvolution
A bioinformatics tool for working with modified bases
Missing value imputation in methylation data R package
Detecting methylation using signal-level features from Nanopore sequencing reads of plants
Bioinformatics library in Kotlin
Arioc: GPU-accelerated DNA short-read alignment
DNA methylation analysis pipeline for reduced representation bissulfite sequencing data
A (mostly) universal methylation extractor for BS-seq experiments.
Find Prokaryotic DNA methylase genes in proteins, contigs, or genomes
Genome assembly steps (Haliotis asinina)
A comprehensive DNA methylation atlas for the Chinese population through nanopore long-read sequencing of 106 individuals
Convert methylation data to sparse objects for machine learning.
Methylation/modified base calling separated from basecalling.
This is a repository to show my experience analyzing different kinds of Omics data.
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