Methylation/modified base calling separated from basecalling.
-
Updated
May 21, 2024 - Python
Methylation/modified base calling separated from basecalling.
Deep neural networks for predicting CpG methylation
tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
Detecting methylation using signal-level features from Nanopore sequencing reads
Detecting methylation using signal-level features from Nanopore sequencing reads of plants
Python package to analyze DNA methylation data
MethPhaser: methylation-based haplotype phasing of human genomes
Python-based preprocessing software for Illumina methylation arrays
A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.
ENCODE whole-genome bisulfite sequencing (WGBS) pipeline
BiSulfite Bolt - A Bisulfite Sequencing Alignment and Processing Tool
Mapping pipeline for snmC-seq based technologies.
Python package with CLI for downstream analysis of single cell methylation data.
An efficient, documented, reproducible Snakemake methylation analysis pipeline for BS-seq and EM-seq samples, including cfDNA.
Toolkit for concretely describing non-canonical DNA, RNA, and proteins
pyllelic: a tool for detection of allele-specific methylation variation in bisulfite DNA sequencing.
An open platform which provides information about miRNAs and genes from different popular databases
Bismark-MethylDackel DNA methylation quantification pipeline in snakemake.
A Python API library for exploration and data retrieval from NCBI
Add a description, image, and links to the methylation topic page so that developers can more easily learn about it.
To associate your repository with the methylation topic, visit your repo's landing page and select "manage topics."