membrane-proteins
Here are 14 public repositories matching this topic...
A Python package designed for analyzing the internal degrees of freedom within molecular structures, focusing particularly on membrane proteins. It conducts statistical analyses, providing deep insights into the dynamics and flexibility of molecular interactions. Ideal for finding the most flexible regions within a protein.
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Apr 11, 2024 - Python
The ProLint Webserver
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Jun 8, 2021 - JavaScript
A gromacs tutorial for creating a gromos54A7 simulation system of a protein in a simple membrane
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Mar 18, 2023 - Shell
A software for membrane analysis and subtraction in cryo-EM.
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Mar 15, 2024 - Jupyter Notebook
Source code for building the EncoMPASS database
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Feb 2, 2024 - Python
A statistical model to predict heterologous membrane protein expression in E. coli!
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Feb 12, 2020 - R
Dataset of the "Integrative Modeling of Membrane-associated Protein Assemblies" manuscript
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Oct 14, 2020 - Shell
uwseds-group-OPMxplore created by GitHub Classroom
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Dec 14, 2017 - Jupyter Notebook
Membrane alpha helix packing and orientation predicrtor
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Apr 17, 2024 - Perl
The Website of the Ramiréz Lab
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Jul 10, 2024 - HTML
A small Python package to set up electrostatic solvation free energy ("Born energy") calculations of an ion in a membrane protein and calculate the electrostatic free energy with APBS .
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Mar 1, 2022 - Python
Prolint2 is an optimized tool for analyzing and visualizing lipid-protein interactions from molecular dynamics trajectories.
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May 20, 2024 - Python
Membrane helix prediction with SVMs
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May 23, 2023 - Perl
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