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@Lucy-Forrest-Lab

Lucy Forrest's Lab

Computational Structural Biology Lab at NINDS

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  1. HDXer HDXer Public

    HDXer is a package to compute Hydrogen-Deuterium exchange data from biomolecular simulations, compare to experiment, and perform ensemble refinement to fit a structrual ensemble to the experimental…

    Python 14 6

  2. AlignMe AlignMe Public

    Pairwise alignment of membrane protein sequences

    C++ 6

  3. EncoMPASS-containers-deps EncoMPASS-containers-deps Public

    Singularity definition files for development and maintenance of the EncoMPASS database. Does not contain any scientific software: only Linux packages or libraries needed for their installation.

    4

  4. MemSTATS_benchmark MemSTATS_benchmark Public

    Quaternary and internal symmetries in membrane protein structures with unique folds

    Python 3 1

  5. hm_analysis_tool hm_analysis_tool Public

    A set of tools to analyze homology models obtained with MODELLER

    Python 3 2

  6. hdxer_tutorials_livecoms hdxer_tutorials_livecoms Public

    Repository for the LiveCoMS HDXer tutorials article

    TeX 3

Repositories

Showing 9 of 9 repositories
  • EncoMPASS_build Public

    Source code for building the EncoMPASS database

    Lucy-Forrest-Lab/EncoMPASS_build’s past year of commit activity
    Python 1 BSD-3-Clause 0 0 0 Updated Feb 2, 2024
  • EncoMPASS-containers-deps Public

    Singularity definition files for development and maintenance of the EncoMPASS database. Does not contain any scientific software: only Linux packages or libraries needed for their installation.

    Lucy-Forrest-Lab/EncoMPASS-containers-deps’s past year of commit activity
    4 0 0 0 Updated Dec 21, 2023
  • AlignMe Public

    Pairwise alignment of membrane protein sequences

    Lucy-Forrest-Lab/AlignMe’s past year of commit activity
    C++ 6 0 3 (1 issue needs help) 0 Updated Aug 31, 2023
  • HDXer Public

    HDXer is a package to compute Hydrogen-Deuterium exchange data from biomolecular simulations, compare to experiment, and perform ensemble refinement to fit a structrual ensemble to the experimental data

    Lucy-Forrest-Lab/HDXer’s past year of commit activity
    Python 14 BSD-3-Clause 6 6 0 Updated Apr 17, 2023
  • hdxer_tutorials_livecoms Public

    Repository for the LiveCoMS HDXer tutorials article

    Lucy-Forrest-Lab/hdxer_tutorials_livecoms’s past year of commit activity
    TeX 3 0 1 0 Updated Aug 30, 2022
  • hm_analysis_tool Public

    A set of tools to analyze homology models obtained with MODELLER

    Lucy-Forrest-Lab/hm_analysis_tool’s past year of commit activity
    Python 3 2 4 0 Updated Jul 6, 2021
  • consensus_struct_align Public

    Create a Consensus of Structural Alignments

    Lucy-Forrest-Lab/consensus_struct_align’s past year of commit activity
    Perl 1 1 0 0 Updated Aug 6, 2020
  • MemSTATS_benchmark Public

    Quaternary and internal symmetries in membrane protein structures with unique folds

    Lucy-Forrest-Lab/MemSTATS_benchmark’s past year of commit activity
    Python 3 Unlicense 1 0 0 Updated Aug 2, 2020
  • HOMEP3.1 Public
    Lucy-Forrest-Lab/HOMEP3.1’s past year of commit activity
    Python 1 1 0 0 Updated Sep 16, 2016

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