Assembly of Phylogenomic Datasets from High-Throughput Sequencing data

vSNP -- validate SNPs

A toolset for handling sequencing data with unique molecular identifiers (UMIs)

uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)

Infer metadata for your downstream analysis straight from your RNA-seq data

Processing, quality control and analysis of GAM datsets

Sargasso disambiguates mixed-species high-throughput sequencing data.

vSNP -- validate SNPs

Distributed iterative finite element analysis with high throughput computing

Given a set of BAM files and a gene annotation BED file, calculates the Transcript Integrity Number (TIN) for each transcript.

Automated processing and haplotype inference for double-barcoded PCR amplicons

NGS Processing Pipelines for WGS and WES data

RADx-rad pipeline for metagenomic data and analysis of SARS-CoV-2 from wastewater