Pipeline for tracking tumor clone evolution over time and space.
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Updated
Jul 11, 2017 - Shell
Pipeline for tracking tumor clone evolution over time and space.
This is the code for the chromatin packing model in macrogenomics engineering study
Texture Analysis test tool for PET images
Rossman R., Yackulic C., Saunders S.P., Reid J., Davis R., and Zipkin E.F. 2016. Dynamic N-occupancy models: estimating demographic rates and local abundances from detection-nondetection data. Ecology. 97: 3300-3307.
Power capping the cpu and exploiting heterogenity using charm++ load balancers
Authors' implementation for "Ab initio tomography with object heterogeneity and unknown viewing parameters", IEEE ICIP 2019
Generalization of Stable Marriage Problem: group sizes and active members within each group
Scripts used for the simulations in Ghysels et al. (2019)
Plotting utility for a "clockplot" that puts groups into a time-ordered heterogeneity visualization
Measuring and visualizing biomedical data variability/heterogeneity across data sources
Weighted In Silico Pathology: a novel approach to assess intra-tumoral heterogeneity
The development version of the frailtyEM R package, that fits several types of shared frailty models
MicroRaman is an R package to process microbial Raman Spectroscopy data
Estimate abundance using capture-recapture models
Inspired by Hillebrand & Medeiros (2009) and Corsi (2009), I put neural networks in a High frequency environment, and tested the performance of the two models (HAR & Neural Networks). - The data used in this project is 2 years worth of intraday 5-minute realized volatility (See: Sheppard, Patton, Liu, 2012) from 20 Dow Jones stocks, that has bee…
R code for the discovery of COVID-19 subgroups by symptoms and comorbidities.
Classifying Breast Cancer Molecular Subtypes
Quantifying Systematic Heterogeneity in Meta-Analysis
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