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  1. BLCAsubtyping BLCAsubtyping Public

    Transcriptomic tools to classify bladder tumours according to six published molecular classifications : Baylor, UNC, MDA, Lund, CIT-Curie, TCGA

    R 23 7

  2. consensusMIBC consensusMIBC Public

    Transcriptomic classifier for Muscle-Invasive Bladder Cancer

    R 13 7

  3. mMCP-counter mMCP-counter Public

    Murine version of MCP-counter, a tool to estimate the immune and stromal composition of heterogeneous tissue, from transcriptomic data

    R 9 6

  4. MS.liverK MS.liverK Public

    Molecular classification of hepatocellular carcinoma samples

    R 7 1

  5. SMAP SMAP Public

    SMAP: sequencing patient-derived xenografts

    Python 4 1

  6. WISP WISP Public

    Weighted In Silico Pathology: a novel approach to assess intra-tumoral heterogeneity

    R 4

Repositories

Showing 8 of 8 repositories
  • BLCAsubtyping Public

    Transcriptomic tools to classify bladder tumours according to six published molecular classifications : Baylor, UNC, MDA, Lund, CIT-Curie, TCGA

    cit-bioinfo/BLCAsubtyping’s past year of commit activity
    R 23 GPL-2.0 7 2 0 Updated Dec 21, 2022
  • consensusMIBC Public

    Transcriptomic classifier for Muscle-Invasive Bladder Cancer

    cit-bioinfo/consensusMIBC’s past year of commit activity
    R 13 GPL-2.0 7 1 1 Updated Oct 5, 2022
  • mMCP-counter Public

    Murine version of MCP-counter, a tool to estimate the immune and stromal composition of heterogeneous tissue, from transcriptomic data

    cit-bioinfo/mMCP-counter’s past year of commit activity
    R 9 GPL-3.0 6 2 0 Updated Jun 30, 2022
  • BuildConsensus Public

    Building a consensus classification system from series of classification systems

    cit-bioinfo/BuildConsensus’s past year of commit activity
    R 2 GPL-3.0 1 0 0 Updated Nov 26, 2019
  • MS.liverK Public

    Molecular classification of hepatocellular carcinoma samples

    cit-bioinfo/MS.liverK’s past year of commit activity
    R 7 GPL-2.0 1 1 0 Updated Aug 14, 2019
  • WISP Public

    Weighted In Silico Pathology: a novel approach to assess intra-tumoral heterogeneity

    cit-bioinfo/WISP’s past year of commit activity
    R 4 Apache-2.0 0 0 0 Updated Jun 6, 2019
  • SMAP Public

    SMAP: sequencing patient-derived xenografts

    cit-bioinfo/SMAP’s past year of commit activity
    Python 4 Apache-2.0 1 0 0 Updated Jun 5, 2019
  • TCGA_PAAD_survival Public

    Survival analysis of gene expression in the curated TCGA pancreatic adenocarcinoma dataset.

    cit-bioinfo/TCGA_PAAD_survival’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jan 3, 2019

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