Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)
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Jul 6, 2022 - R
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edna
Here are 10 public repositories matching this topic...
Data processing workflow and supplementary data for Li et al. 2019 - Ground-truthing of a fish-based environmental DNA metabarcoding method for assessing the quality of lakes
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Jun 5, 2019 - R
Official GitHub repository for the R package "Species Identity and Evolution in R" (spider)
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Mar 7, 2019 - R
Environmental DNA reflects common mitochondrial haplotypic variation
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Aug 12, 2022 - R
Primer scripts to produce meaningful visualisations from pre-processed metabarcoding data
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Jul 13, 2023 - R
Data processing workflow and supplementary data for Li et al. 2018 - The effect of filtration method on the efficiency of environmental DNA capture and quantification via metabarcoding
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May 16, 2018 - R
Data & Code Supplement for "Environmental DNA as a management tool for tracking artificial waterhole use in savanna ecosystems"
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Aug 9, 2022 - R
Supplementary files for the paper "Environmental DNA metabarcoding of Danish soil samples reveals new insight into the hidden diversity of eutardigrades in Denmark"
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Jun 9, 2023 - R
A set of functions for filtering erroneous sequences in eDNA metabarcoding data
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Mar 30, 2023 - R
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