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species-identity

Here are 4 public repositories matching this topic...

ccb-id

stanford-ccb / ccb-id

The Center for Conservation Biology's imaging-spectroscopy-based species classification approach.

machine-learning remote-sensing classification ecology biogeography species-identity

Updated Jul 4, 2022
Python

raymondkiu / bactspeciesID

Fast microbial species identification (16S rRNA gene-based approach) and contamination check using whole genome assemblies

microbial-genomics genome-assembly contamination-detection species-identity 16s-rrna species-identification abricate barrnap

Updated Oct 20, 2020
Shell

boopsboops / spider

Official GitHub repository for the R package "Species Identity and Evolution in R" (spider)

r evolution edna species-delimitation dna-barcode species-identity

Updated Mar 7, 2019
R

NataliaKudr / SpeciesIdentification

Species identification based on mass spectrometry biomarker clustering

binary-data python3 species mass-spectrometry clustering-algorithm clustering-evaluation collagen hierarchical-clustering biomarkers k-modes k-means-implementation-in-python species-identity species-identification collagen-peptidemass-fingerprinting

Updated Apr 18, 2019
Jupyter Notebook

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