Nengo library of additional extensions
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Updated
Apr 10, 2023 - Python
Nengo library of additional extensions
Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portrait features. Includes specific example on dynamical systems, synthetic- and real neural datasets. https://agosztolai.github.io/MARBLE/
Whole-cell modeling tutorials
Official implementation of Enhanced Gaussian process dynamical models with knowledge transfer for long-term battery degradation forecasting.
Framework for systematically and scalably designing whole-cell models from large datasets
COPASI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Code associated with the Karr Lab's 2018 whole-cell modeling review in Current Opinion in Biotechnology
Using Python with matplotlib to calculate and visualize/analyze randomly seeded orbits of 3 different functions.
Detailed paper describing python program to calculate fixed points of various functions and calculate the order of the orbits for a given seed.
PyPi package of Reward-Modulated Self Organizing Recurrent Neural Network
tellurium biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
BioNetGen biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
GillesPy2 biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Generate DAEs of k-pendulums.
Computational model for the report: Work scenarios in the ecosocial transition - 2020-2030.
Dynamics of Newton's Method for a Nonanalytical Perturbation on a Complex Quadratic Function
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