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cutadapt

Here are 4 public repositories matching this topic...

digo4 / Clinical-Genomics

Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline

picard samtools bwa-mem varscan bcftools bowtie2 trimgalore cutadapt fastqc freebayes fastp gatk4 trimmomatic gatk-bestpractices gatk-joint-variant-calling-workflow gatk-cnv gatk4-haplotypecaller

Updated Jan 17, 2024
Shell

hisplan / docker-cutadapt

Dockerized cutadapt

docker cutadapt

Updated Aug 4, 2021
Shell

DavideScarpetta / taxonomic_profiling

Metabarcoding analysis pipeline, using DADA2 and qiime2

bioinformatics bioinformatics-pipeline metabarcoding dada2 cutadapt qiime2 taxonomic-profiling metabarcoding-data

Updated Jan 9, 2024
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cyverseuk / cutadapt

dockerfile bioinformatics hpc cyverseuk agaveapi hpc-applications cutadapt

Updated May 8, 2017
Shell

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