earmingol / cell2cell Star 55 Code Issues Pull requests User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins machine-learning bioinformatics rna-seq computational-biology rnaseq single-cell single-cell-rna-seq bulk-rna-seq sc-rna-seq cell-cell-interaction cell-cell-communication Updated Jun 14, 2024 Python
QBRC / QBRC_BulkRnaSeqDE Star 2 Code Issues Pull requests Analysis pipeline for bulk RNA-seq data alignment differential-expression bulk-rna-seq Updated Aug 18, 2022 Python
metavannier / metatranscriptomics-bulkrnaseq_workflow Star 0 Code Issues Pull requests This workflow performs a metatranscriptomics and bulk RNAseq analysis from the sequencing output data to the differential expression analyses. docker bioinformatics snakemake singularity slurm-cluster metatranscriptomics conda-environment bulk-rna-seq Updated Jul 27, 2022 Python
maxozo / eqtl Star 0 Code Issues Pull requests scrna-seq eqtl bulk-rna-seq eqtl-mapping Updated Oct 26, 2023 Python