Shell script to post-process OrthoFinder's output into pairwise tables used in macrosyntR
-
Updated
Mar 1, 2023 - Shell
Shell script to post-process OrthoFinder's output into pairwise tables used in macrosyntR
Scripts for Basecalling on GridION Sequenicng machines from Oxford Nanopore
CocoTF: a workflow to identify context specific co-occurring TF motifs using bedtools, Homer and R packages.
A script that efficiently processes multiple '.fastq' files, automatically organizing the pre-trimmed output into a folder named 'qc_reports_pretrim' for streamlined quality control and sequence data analysis.
A Python workflow for taking chemicals, finding the genes they interact with, and mapping the communities of genetic interactions.
Bu sayfada Biyoinformatik analizler ile ilgili eğitim materyalleri bulunmaktadır.
slurm and pbs scripts for genome, metagenome, transcriptome analysis.
Shell script to sort .gtf files
Pipeline to prepare RNA sequencing data for tandem repeat annotation with TRAL
SLURM job temps @UAlbany
Computational analysis of the evolutionarily conserved Missing In Metastasis / Metastasis Suppressor 1 gene predicts novel interactions, regulatory regions and transcriptional control (Petrov et al. 2019 Sci Rep)
A shell script that uses diamond to compute the reciprocal best hits between two proteomes in a rush.
Set of scripts to process RAD-Seq HTS data on computing grids like MetaCentrum.
Scripts for executing a filtering, clustering and identification pipeline for eDNA samples.
a sequence analysis workflow for low-input nanopore sequencing
Assorted scripts in Perl, Bash, R and whatsoever directly from a bioinformatician's scripts/ folder
A gallimaufry of questionable shellscripts
Synchronise Nanopore reads with a server.
A simple batch submission script to submit jobs to AutoDock Vina on Linux and MacOS developed by Bhavesh Ashok.
Add a description, image, and links to the bioinformatics-scripts topic page so that developers can more easily learn about it.
To associate your repository with the bioinformatics-scripts topic, visit your repo's landing page and select "manage topics."