Lab for Proteoform Systems Biology
At the Sheynkman Lab, we study disease-relevant protein forms, or “proteoforms”, by integrating cutting-edge analytical and computational approaches from genomi
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Long-Read-Proteogenomics
Long-Read-Proteogenomics Public templateA workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.
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splice-event-to-isoform-pipeline
splice-event-to-isoform-pipeline PublicShay's splice event to isoform integration pipeline
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SQANTI3_protein
SQANTI3_protein PublicForked from ConesaLab/SQANTI3
Repository of SQANTI3 tool for Quality Control of Long-Read Defined Transcriptomes
Python 1
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Repositories
Showing 10 of 20 repositories
- zhang_mouse_aging Public
sheynkman-lab/zhang_mouse_aging’s past year of commit activity - sheynkman-lab-docs Public
sheynkman-lab/sheynkman-lab-docs’s past year of commit activity - pdb-isoform-analysis Public
Comparison of all available PDB chains (human) to the alternative isoforms in GENCODE.
sheynkman-lab/pdb-isoform-analysis’s past year of commit activity - revio-mas-bulk-benchmark Public
sheynkman-lab/revio-mas-bulk-benchmark’s past year of commit activity - sqtl_pipeline_v2 Public Forked from MayankMurali/sqtl_pipeline
Pipeline to map sQTLs to protein isoforms
sheynkman-lab/sqtl_pipeline_v2’s past year of commit activity - Coon_isoform_analysis Public
Looking at things related to data from https://www.nature.com/articles/s41587-023-01714-x#Sec24
sheynkman-lab/Coon_isoform_analysis’s past year of commit activity