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Pull requests: saeyslab/nichenetr

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Pull requests list

Fix bug in generate_info_tables
#279 by csangara was merged May 30, 2024 Loading…
1
Fixes assign_ligands_to_celltype when there are no general ligands
#277 by csangara was merged May 30, 2024 Loading…
1
Fix bugs in assign_ligands_to_celltype
#275 by csangara was merged May 29, 2024 Loading…
1
Added checks for get_exprs_avg in case cell type names have an underscore
#274 by csangara was merged May 30, 2024 Loading…
1
Fixed make_line_plot bugs
#273 by csangara was merged May 29, 2024 Loading…
1
Version 2.1
#261 by csangara was merged Apr 25, 2024 Loading…
Fixed wrapper function for Seurat v5 objects
#259 by csangara was merged Mar 25, 2024 Loading…
2
get_expressed_genes - fix for Seurat v5 and add method for matrices
#250 by csangara was merged Jan 29, 2024 Loading…
1
1
Unit testing
#248 by csangara was merged Jan 17, 2024 Loading…
get_expressed_genes - fix for Seurat v5 and add method for matrices
#247 by csangara was closed Jan 29, 2024 Loading…
1
2
Issue 198 fix
#230 by csangara was merged Oct 2, 2023 Loading…
Add sf as weak dependency as suggested by sp package
#225 by molecules was merged Sep 27, 2023 Loading…
1
NicheNet v2
#201 by csangara was merged Jun 21, 2023 Loading…
Prioritization scheme
#195 by csangara was merged May 23, 2023 Loading…
Preserve plot labels when only one ligand/target pair is detected
#179 by gbrsales was merged Nov 9, 2022 Loading…
Update differential_nichenet_plotting.R
#165 by koetjen was merged Aug 25, 2022 Loading…
1
Update differential_nichenet_plotting.R
#164 by koetjen was merged Aug 22, 2022 Loading…
1
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