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Issues: phenopackets/phenopacket-format

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Issues list

treatment histories
#2 opened Sep 14, 2015 by harryhoch updated Sep 14, 2015
2
negation
#3 opened Sep 14, 2015 by harryhoch updated Oct 16, 2015
1
tool + PED
#7 opened Oct 16, 2015 by drseb updated Oct 16, 2015
consider scope.
#1 opened Sep 14, 2015 by harryhoch updated Oct 16, 2015
3
add table to paper that discusses need for genotype standardization
#9 opened Nov 11, 2015 by mellybelly updated Nov 11, 2015
consider VCF format specification
#12 opened Dec 19, 2015 by mellybelly updated Dec 19, 2015
2
temporal onset
#4 opened Sep 14, 2015 by harryhoch updated Feb 4, 2016
2
need association types
#15 opened Feb 9, 2016 by mellybelly updated Feb 9, 2016
Modifiers
#16 opened Feb 10, 2016 by pnrobinson updated Feb 10, 2016
1
Traceable author statements that are referred to in other papers
#17 opened Feb 10, 2016 by jmcmurry updated Feb 10, 2016
negation
#20 opened Feb 10, 2016 by harryhoch updated Feb 10, 2016
Suggestion for output format
#21 opened Feb 11, 2016 by pnrobinson updated Feb 11, 2016
2
example for VCF files
#11 opened Nov 18, 2015 by mellybelly updated Feb 15, 2016
2
Should YAML subset be restricted to what is expressible in JSON (meaning exclude the ability to use references)
#24 opened Feb 15, 2016 by cmungall updated Feb 15, 2016
3
Investigate approaches to patient identification identifiers
#26 opened Feb 16, 2016 by jmcmurry updated Feb 18, 2016
4
Investigate versioning of phenopacket instances due to evolution in representation and disease progression identifiers
#29 opened Feb 17, 2016 by jmcmurry updated Feb 18, 2016
Document mechanism for referencing entities within and across documents identifiers
#22 opened Feb 15, 2016 by cmungall updated Feb 18, 2016
Specify allowable age/DOB values
#33 opened Feb 20, 2016 by mellybelly updated Feb 21, 2016
3
In BioLark output, include frequency of mined terms biolark enhancement
#36 opened Feb 25, 2016 by jmcmurry updated Feb 29, 2016
In BioLark, enable user to configure ontologies used for mining biolark enhancement identifiers
#38 opened Feb 25, 2016 by jmcmurry updated Feb 29, 2016
2
Automate generation of documentation from schema
#42 opened Mar 7, 2016 by cmungall updated Mar 7, 2016
Document strategy for implementation in APIs
#43 opened Mar 7, 2016 by cmungall updated Mar 7, 2016
consider RTD for doucmentaton
#48 opened Mar 8, 2016 by cmungall updated Mar 8, 2016
investigate possibility for a global IRI scheme for uniquely identifying a variant identifiers variation
#23 opened Feb 15, 2016 by cmungall updated Mar 8, 2016
1
Add JSON-Schema validator to travis variation
#41 opened Mar 7, 2016 by cmungall updated Mar 9, 2016
3
ProTip! What’s not been updated in a month: updated:<2024-10-03.